Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 441 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Magnetospirillum magneticum AMB-1

 Score =  232 bits (591), Expect = 2e-65
 Identities = 168/457 (36%), Positives = 238/457 (52%), Gaps = 22/457 (4%)

Query: 5   DTIAAIATPLGQGGIGIIRISGPASLEVLRALFRPSSSRFGGFRPWTLHHGTITDGC-DP 63
           +TI A+A+  G+ GI + R+SG  S   L AL            P       + DG  + 
Sbjct: 3   ETIYALASAAGRAGIAVWRLSGEGSGTALSALTGKPLPE-----PRRARRVRLRDGAGEV 57

Query: 64  LDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACVRHGARYAERGEFTRRAFLNG 123
           LDD L +  P P +FTGEDV+E+H HGG  V AA+       G R AE GEF+RRAFLNG
Sbjct: 58  LDDGLVLWFPAPHSFTGEDVAELHLHGGRAVAAALTARLGELGLRPAEPGEFSRRAFLNG 117

Query: 124 RMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVDFPEE 183
           ++DLT+AEA+A+++ A +    R A  +LDG L   V   R+ L      L   +DF +E
Sbjct: 118 KLDLTRAEAIADLVDAETAAQRRQALRQLDGGLAGLVEGWRSALVRAMAHLEAVIDFADE 177

Query: 184 EVECLAPEAFLAEIEAVRQGV-VELSAGYARTRCWQDGALVVLAGQVNAGKSSLMNALLG 242
           ++     E  + E+ ++R+ + V L       R  +DG  + + G  NAGKSSL+N L G
Sbjct: 178 DIPDTLLEQSVGEVRSLRREMEVHLDERRNGERL-RDGIHITILGAPNAGKSSLLNRLAG 236

Query: 243 RRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLVAQADL 302
           R  AIV+   GTTRD IE  L+L G  + +ADTAGLR++   +E EGVR + D  A+ADL
Sbjct: 237 REAAIVSAQAGTTRDVIEVHLDLGGWPVIVADTAGLRDSACEIESEGVRRAADRAAKADL 296

Query: 303 VLLVTDAT--QGLQGPELELLRHAGPERVLVVFNKTDLLEGRILPSTPEGCRSVHVAAAS 360
            L V D T    L    LE++  A     LVV NK DL+ G   P++  G   + ++A +
Sbjct: 297 RLCVFDGTLYPNLDAATLEMIDDA----TLVVLNKRDLMTGE-TPASINGRPVLTLSAKA 351

Query: 361 GDGVESLVTAIRAAVLAATGAGEPEAGELAPNMRQAAALDKAATILDELAGDIRAHVPYD 420
           G+GV+ LV  +   V +    G   +  +    R   A+ +A   L      +      +
Sbjct: 352 GEGVDDLVAELARVVESRFAMG---SAPVLTRERHRVAVAEAVAALSRFDPGL----GIE 404

Query: 421 LCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
           +    L  A  +L  +TG+   E ILD IF  FCIGK
Sbjct: 405 MAAEDLRLAARSLGRITGRVDVEEILDVIFHEFCIGK 441