Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 435 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  218 bits (555), Expect = 3e-61
 Identities = 167/457 (36%), Positives = 233/457 (50%), Gaps = 28/457 (6%)

Query: 5   DTIAAIATPLGQGGIGIIRISGPASLEVLRALFRPSSSRFGGFRPWTLHHGTITDGCDPL 64
           DTI A+ATP G+G I ++R+SGP     L AL    ++R    +P       ++   D +
Sbjct: 3   DTIFALATPPGRGAIAVLRLSGPGVEAALTAL---GATRL---KPRIASVRDLSHAGDHI 56

Query: 65  DDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACVRHGARYAERGEFTRRAFLNGR 124
           D  L +    P ++TGED +E+H HGG  V+ A   A +  G R A+ GEFTRRAF NGR
Sbjct: 57  DQALVLRFVAPNSYTGEDAAELHLHGGRAVVEAASRALIALGLRPADPGEFTRRAFQNGR 116

Query: 125 MDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVDFPEEE 184
           MDL QAEAVA++I A +    + A  +LDG L +     R  L      +   +DFP+EE
Sbjct: 117 MDLAQAEAVADLIDAETSAQAKQALGQLDGKLSETYAGFRRDLLHALALIEAEIDFPDEE 176

Query: 185 V-ECLAPEA--FLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKSSLMNALL 241
           V + LA  A   L  + A  +  V+      R R   +G  +VL G+ NAGKSSL NAL+
Sbjct: 177 VPDNLARTAGPVLDRLGADLRRAVDTGRRGERVR---EGYRIVLIGETNAGKSSLFNALV 233

Query: 242 GRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLVAQAD 301
            R  AIVT + GTTRD ++  L + G A+ L+DTAGLR++ D VE EGVR +R     AD
Sbjct: 234 AREAAIVTPIAGTTRDVLDADLVIGGYAVTLSDTAGLRDSDDPVEAEGVRRARLRAEHAD 293

Query: 302 LVLLVTDATQGLQGPELELLRHAGPERVLVVFNKTDLLEGRILPSTPEGCRSVHVAAASG 361
           L L V  A     G     ++       L+V  K+DL  G    S      ++ V+  +G
Sbjct: 294 LRLWVR-APGDPDGVAAAYVKDGD----LIVATKSDLGAG----SGEGEYETLAVSTVTG 344

Query: 362 DGVESLVTAIRAAVLA-ATGAGEPEAGELAPNMRQAAALDKAATILDELAGDIRAHVPYD 420
            G+  L   I A +    +GA  P   +    +R   AL+         A     +V  +
Sbjct: 345 AGLAELRDWIAARLAQDLSGADFPSVTQERHRLRLLEALESVD------AARAALNVAPE 398

Query: 421 LCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
           + G  L  A  A+  VTG    E IL  +F++FCIGK
Sbjct: 399 MAGDDLRRAADAMARVTGAIGVEDILGEVFSTFCIGK 435