Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 442 a.a., tRNA modification GTPase from Agrobacterium fabrum C58

 Score =  193 bits (491), Expect = 8e-54
 Identities = 155/460 (33%), Positives = 231/460 (50%), Gaps = 30/460 (6%)

Query: 5   DTIAAIATPLGQGGIGIIRISGPASLEVLRALFRPSSSRFGGFRPWTLHHGTITD-GCDP 63
           DTI A+++     G+ +IRISG  +   LRAL            P T    +I +   + 
Sbjct: 6   DTIYALSSGALPAGVAVIRISGAKAFIALRALTGRDLPL-----PRTASLCSIRNRNNEI 60

Query: 64  LDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVL-EACVRHGARYAERGEFTRRAFLN 122
           +D  L +  P P +FTGE+  EIH HG   V+A++  E     G R A+ GEF+RRAF N
Sbjct: 61  IDQSLVIVFPAPNSFTGENCVEIHSHGSRAVMASIFAELDNLGGLRPADAGEFSRRAFEN 120

Query: 123 GRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVDFPE 182
           G+MDL + E +A+++ A +    RLA  +  G L         RL   R  +   +DF +
Sbjct: 121 GKMDLLEVEGLADLLQAETEMQRRLAVEQSSGQLSALYDGWANRLTRARALIEAELDFAD 180

Query: 183 EEVECLAPEAFLAEI-EAVRQGVVELSA---GYARTRCWQDGALVVLAGQVNAGKSSLMN 238
           EE     P++   ++ EA+     E++A   G       +DG  V L G+ NAGKS+L+N
Sbjct: 181 EED---VPDSVATQVWEAMAALKGEINAHLQGGGNGEIIRDGFKVALVGEPNAGKSTLLN 237

Query: 239 ALLGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLVA 298
           AL GR  AIVTD+ GTTRD +   +NL G  +R+ DTAG+RET D+VE+EGVR +     
Sbjct: 238 ALSGREVAIVTDIAGTTRDVLSVDINLDGYLVRIFDTAGIRETQDVVEREGVRRAVLTAE 297

Query: 299 QADLVLLVTDATQGLQGPELELLRHAGPERVLVVFNKTDLLEGRILPSTPEGCRSVHVAA 358
            ADL+L++ D          + +     +R L V  KT LL  R      +    + ++A
Sbjct: 298 TADLILILQDN----DSTPKQSIGSFDNQRSLRVRTKT-LLRSR----ASDDDFDLSISA 348

Query: 359 ASGDGVESLVTAIRAAVLAATGAGEPEAGELAPN-MRQAAALDKAATILDELAGDIRAHV 417
             G G++ L  A++  +    G+G+      A +  R    L+  +  LD    D+    
Sbjct: 349 KEGIGLDELRRALKREIEKRVGSGQTLVPARARHKKRLEETLNYVSDALDSETLDLAIRS 408

Query: 418 PYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
            Y    +RL  A  +L  +TG+   E +L  IF+ FCIGK
Sbjct: 409 EY----LRL--AATSLGRITGRVDVEDLLGVIFSEFCIGK 442