Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 568 a.a., Inner membrane protein translocase component YidC, long form from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  254 bits (649), Expect = 6e-72
 Identities = 178/556 (32%), Positives = 281/556 (50%), Gaps = 44/556 (7%)

Query: 4   KRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVP-----------ATEQ---KTAASAPAPS 49
           +R+I+ VV    +++ W     + G  P   P           +T Q    T+A  P+ +
Sbjct: 5   RRSILWVVFGLSMVLIWDKWQIHNGHKPTFFPGSAPAVTAPAASTSQPAGSTSAGVPSST 64

Query: 50  VVTSAPEAVTPAPAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGI----DRD 105
             T+AP   TPA A   +      VTT L+K V +S GG L    L ++        D+ 
Sbjct: 65  QATAAPGVETPAAA-PGAVAQRHEVTTDLFKLVFNSEGGSLIGAELLKHAEATGQSKDKT 123

Query: 106 AAPVNLIESSA--IRVAPLGLLVNGQPSWNTGQWAFEGGDLNLADGQTGT-LRFVGS-VD 161
             P  L+      I VA  GL+    P+  T      G   +LADGQ    +RF  + V 
Sbjct: 124 ERPFTLLAQGGEHIYVAQTGLIGGNFPTHKTPM-TLVGNPTSLADGQNELQVRFESAEVG 182

Query: 162 GLRVVRELEFHADSYLVTEKLHLAPEGDAPRTARVGFTL-----GTTSLTPGESQYNLTR 216
           G+++++   F    Y +  +  +   G    T ++   L       +S TP  S +  T 
Sbjct: 183 GVKLIKTYTFTRGRYDIGVQHEVKNVGGQAVTPQLYQQLVRDGSKLSSETPFYSTF--TG 240

Query: 217 VAWFADGSFSEKSSTGDLEKG---VLIDGSIDWAGVMSNYFLAA--VAPKDTRAVLKGKL 271
            A + +    +K    ++EK     +   S  +  ++ +YF +A  +     R     K+
Sbjct: 241 PAVYTNEKKYQKIEFANIEKDKAEFVKTASDGYVAMVQHYFASAWLLGEGVARENFARKI 300

Query: 272 EGGVYRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKAIDLGWFGFIARP 331
           +  ++ V        + PG S       + GP+E  +L      L    D GW   +A+P
Sbjct: 301 DNNLFAVGSITALTAIEPGQSQSQQSRLFLGPQEEKVLETIAPGLELVKDYGWLTILAKP 360

Query: 332 LVTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHAD 391
           L  LL+  + YV N+G AI+LL +LIK  F+ L+  +Y+SM +MKK+ P + ++RE+   
Sbjct: 361 LYWLLEKIHGYVANWGWAIVLLVVLIKAAFYWLNASAYRSMAKMKKINPRIMEMRERLKG 420

Query: 392 DREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTD 451
           + ++M +EMM++Y+  KVNP GGC P+L+QIPVF  LY  LL+++E+R+AP++A      
Sbjct: 421 NPQQMQQEMMKIYREEKVNPLGGCFPILIQIPVFIALYWVLLSSVEMRNAPWMA------ 474

Query: 452 IVWLADLSAKDPFYVTPLVMGATMFLQQKLTPPAGDPTQAKVMMFMPVVFTFLFLNFPSG 511
             W+ DLS+ DP+++ PLVM  T  +Q  L P   DP QAK+M  MP++F+ +F  FPSG
Sbjct: 475 --WITDLSSPDPYFILPLVMAVTTLIQTALNPLPPDPLQAKLMWLMPLMFSVMFFFFPSG 532

Query: 512 LVVYWLCNNVLSIAQQ 527
           LV+YW+ NNVL+IAQQ
Sbjct: 533 LVLYWITNNVLTIAQQ 548