Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 544 a.a., membrane protein insertase YidC from Pectobacterium carotovorum WPP14

 Score =  266 bits (679), Expect = 2e-75
 Identities = 180/558 (32%), Positives = 283/558 (50%), Gaps = 53/558 (9%)

Query: 1   MENKRAIIAVVLSFIVLVGWGYLSEYMGW-TPKSVPATEQKTAASAPAPSVVTSAPEAVT 59
           M+++R ++ + L F+  + W        W T K+ PAT Q  A      +V   A     
Sbjct: 1   MDSQRNLLLIALLFVTFMLW------QAWETDKNPPATTQ--AIQQATNAVTGDATNQGV 52

Query: 60  PAPAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSA--I 117
           PA       G  +TV T +    +++ GG + Q  L  Y   +  D  P +L+E+++  +
Sbjct: 53  PASG----QGKLITVKTDVLSLTINTRGGDIEQAHLLAYPDTLGSDK-PFHLLETTSEFV 107

Query: 118 RVAPLGLL--------VNG-QPSWNTGQWAFEGGDLNLADGQTGTLRF---VGSVDGLRV 165
             A  GL          NG +P + T Q +FE     LADGQ+  LR      + DG+  
Sbjct: 108 YQAQSGLTGKNGPDNPANGPRPLFTTTQDSFE-----LADGQS-ELRIPMTYTAADGVTY 161

Query: 166 VRELEFHADSYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTP-----GESQYNLTRVAWF 220
            +        Y +     +      P    +   L  +   P     G S + L      
Sbjct: 162 TKTFVLKRGDYALNVDYSVNNTSAQPLELTLFGQLKQSIELPKHRDTGSSNFALHTYRGA 221

Query: 221 ADGSFSEKS---STGDLEKGVLIDGSIDWAGVMSNYFLAAVAPKDTRA--VLKGKLEGGV 275
           A  S  +K    S  D+++ + I  +  W  ++  YF  A  P    A      KL  G 
Sbjct: 222 AFSSSEDKYKKYSFSDMDENLNITTNGGWVAMLQQYFATAWIPTTAGANTFYTSKLGNGQ 281

Query: 276 YRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKAIDLGWFGFIARPLVTL 335
             +  +    +V  G+   +    W GP+ +D + A   +L   +D GW  FI++PL  L
Sbjct: 282 AAIGFKSAPVVVAAGSQQDLKTTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKL 341

Query: 336 LDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREK 395
           L F + ++GN+G +II +T +++ + +PL+   Y SM +M+ LQP L  +RE+  DD+++
Sbjct: 342 LKFLHSFIGNWGFSIIAITFIVRGIMYPLTKAQYTSMAKMRLLQPKLQAMRERIGDDKQR 401

Query: 396 MNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWL 455
           M++EMM LYK+ KVNP GGC P+L+Q+P+F  LY  L+ ++ELRHAPF         +W+
Sbjct: 402 MSQEMMALYKSEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRHAPF--------ALWI 453

Query: 456 ADLSAKDPFYVTPLVMGATMFLQQKLTP-PAGDPTQAKVMMFMPVVFTFLFLNFPSGLVV 514
            DLSA+DP+Y+ P++MG TMF  QK++P    DP Q K+M +MPV+FT  FL FPSGLV+
Sbjct: 454 HDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTYMPVIFTVFFLWFPSGLVM 513

Query: 515 YWLCNNVLSIAQQWWILR 532
           Y++ +N+++I QQ  I R
Sbjct: 514 YYIVSNLVTILQQQLIYR 531