Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 579 a.a., membrane protein insertase YidC from Magnetospirillum magneticum AMB-1

 Score =  270 bits (689), Expect = 1e-76
 Identities = 193/593 (32%), Positives = 283/593 (47%), Gaps = 79/593 (13%)

Query: 2   ENKRAIIAVVLSFIVLVGWGYL------------SEYMGWTPKSVPATEQKTAASAPAPS 49
           + +   +A+ +S  +L+GW Y              +       S PAT   T A+A +P+
Sbjct: 3   DQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAP-TPATASSPA 61

Query: 50  VVTSAPEAVTPAPAFSPSTG----HEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRD 105
            V  +P A    PA + +        + + TP     +   G  +    L +Y      D
Sbjct: 62  QVPGSPAAAAAQPAATRADALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAAD 121

Query: 106 AAPVNLI---ESSAIRVAPLGLLV---NGQPSWNTGQWAFEG-GDLNLADGQTGTLRFVG 158
           +  ++L+   ES     A  G +    N +       W  +G G L  A     T     
Sbjct: 122 SREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLTW---D 178

Query: 159 SVDGLRVVRELEFHADSYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNLTR-V 217
           + +GLR VR      ++Y+      +   G  P +      L  T        Y L    
Sbjct: 179 NGEGLRFVRTYTVD-ENYMFGVAQRVENYGTKPASLHPYALLARTGTPHVAGMYILHEGP 237

Query: 218 AWFADGSFSEKSSTGDLEKGVLIDGSI------DWAGVMSNYFLAAVAPKDTRAVLKGKL 271
               DG+  E     DL+K    +GS        WAG+   Y+L A+ P   +  + G+ 
Sbjct: 238 LGVFDGTLKEMKYD-DLKK----EGSSRHKTTGGWAGITDKYWLTALVPP-AKTEITGRF 291

Query: 272 ------EGGVYRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLG-----KAI 320
                     Y+V    P +M+ PG S+    + + G K+  LL+      G      AI
Sbjct: 292 VHQRLGNADRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKFGIDRFDLAI 351

Query: 321 DLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQP 380
           D GWF F+ +P   LL   +  +GN G AI+ LT+++KL  +PL++KSY +M +MKKLQP
Sbjct: 352 DFGWFYFLTKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVAMGKMKKLQP 411

Query: 381 MLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRH 440
            + +++ ++ADD+ ++ +EMM LYKT KVNP  GCLP++VQIPVFF LY+ L   IE+RH
Sbjct: 412 KVQELQARYADDKMRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKVLFVTIEMRH 471

Query: 441 APFIAHVPFTDIVWLADLSAKDP-------------------FYVTPLVMGATMFLQQKL 481
           APF          W++DLSA+DP                     V PL+MG TMFLQQKL
Sbjct: 472 APFYG--------WISDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQKL 523

Query: 482 TPPAGDPTQAKVMMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWILRKA 534
            P   DP QAK+M F+P++FTFL  NF SGLV+YW  +N LSI QQW I+++A
Sbjct: 524 NPQPTDPVQAKMMQFLPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRA 576