Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 548 a.a., Inner membrane protein translocase component YidC, long form from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  266 bits (680), Expect = 1e-75
 Identities = 173/558 (31%), Positives = 280/558 (50%), Gaps = 51/558 (9%)

Query: 1   MENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEAVTP 60
           M+++R ++ + L F+  + W    +     P++   T+  T A+        SA +   P
Sbjct: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG-------SAADQGVP 53

Query: 61  APAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSA--IR 118
           A       G  +TV T +    +++ GG + Q +L  Y   +  +  P  L+E++   I 
Sbjct: 54  ASG----QGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIY 108

Query: 119 VAPLGLL--------VNG-QPSWNTGQWAFEGGDLNLADGQTGTLRFVGSVD--GLRVVR 167
            A  GL          NG +P +N  + AF      LADGQ      +   D  G    +
Sbjct: 109 QAQSGLTGRDGPDNPANGPRPLYNVEKEAFV-----LADGQNELQVPMTYTDAAGNTFTK 163

Query: 168 ELEFHADSYLVTEKLHLAPEGDAP-RTARVGFTLGTTSLTP----GESQYNLTRVAWFAD 222
              F    Y V     +   G+ P   +  G    + +L P    G S + L      A 
Sbjct: 164 TFVFKRGDYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGAAY 223

Query: 223 GSFSEKSSTGDLE-----KGVLIDGSIDWAGVMSNYFLAAVAPKD--TRAVLKGKLEGGV 275
            +  EK      +     + + +     W  ++  YF  A  P++  T       L  G+
Sbjct: 224 STPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNNFYTANLGNGI 283

Query: 276 YRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKAIDLGWFGFIARPLVTL 335
             +  +    +V PG +  +    W GP+ +D + A   +L   +D GW  FI++PL  L
Sbjct: 284 VAIGYKAQPVLVQPGQTGAMTSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKL 343

Query: 336 LDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREK 395
           L + + +VGN+G +II++T +++ + +PL+   Y SM +M+ LQP +  +RE+  DD+++
Sbjct: 344 LKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQR 403

Query: 396 MNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWL 455
            ++EMM LYK  KVNP GGC P+++Q+P+F  LY  L+ +IELRHAPF         +W+
Sbjct: 404 QSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPF--------ALWI 455

Query: 456 ADLSAKDPFYVTPLVMGATMFLQQKLTP-PAGDPTQAKVMMFMPVVFTFLFLNFPSGLVV 514
            DLSA+DP+Y+ P++MG TMF  QK++P    DP Q K+M FMPV+FT  FL FPSGLV+
Sbjct: 456 HDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVL 515

Query: 515 YWLCNNVLSIAQQWWILR 532
           Y++ +N+++I QQ  I R
Sbjct: 516 YYIVSNLVTIIQQQLIYR 533