Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 598 a.a., membrane protein insertase YidC from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  208 bits (529), Expect = 5e-58
 Identities = 171/610 (28%), Positives = 275/610 (45%), Gaps = 112/610 (18%)

Query: 2   ENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEAVTP- 60
           EN R  I  ++  ++++G  Y +      P++     Q+ A +  + +   +A  A++P 
Sbjct: 4   ENTRNTIIFIVCSVLIMGIYYFAVLR---PQAERRAVQQQAQAEQSQTADNAARTALSPQ 60

Query: 61  APAF------SPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIES 114
            P F      + ST   V + +   K  L   GG +    L+ Y    D+   PV L   
Sbjct: 61  GPTFVTDRSQALSTAARVPIQSGTLKGSLSLQGGRIDDLFLTDYREVQDKPQ-PVELFRP 119

Query: 115 SAIRVAPLGL-------LVNGQPSWNTGQWAFEGGDLNLADGQTGTLRFVGSVDGLRVVR 167
             ++ A           +  G P  NT  W    G   L      TL +     GLR  R
Sbjct: 120 QGMQNAYFAQFGWTGPNVAGGVPGPNT-VWRLTNGS-TLTPTTPVTLTWDNG-QGLRFTR 176

Query: 168 ELEFHADSY----------LVTEKLHLAPEGDAPRTARVGFTLGTTSLT----------P 207
            +    D Y          L T+ + +AP G   R   V    G++ +           P
Sbjct: 177 VISVD-DKYVFSVQDTVQNLGTQAITIAPYGSVQRQG-VPPAAGSSHIVHEGAIGTFGKP 234

Query: 208 GESQYNLTRVAWFADGSFSEKSSTGDLEKGVLIDGSIDWAGVMSNYFLAAVAPKDTRAV- 266
           G+ +    +   +      E +STG             W G+   Y+LAA+ P+   AV 
Sbjct: 235 GDYRTEQKKYKDWLKEPRIENASTGG------------WLGITDKYWLAALLPQQNEAVE 282

Query: 267 -------LKG--KLEGGVYRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLG 317
                  L G  +LE  V         + + PG +       + G K  ++L +   +L 
Sbjct: 283 TEFRVRDLNGAQQLEANVLGTT-----RTIQPGATATETQRLFAGVKRAEVLKSYEQSLN 337

Query: 318 K-----AIDLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSM 372
                 AID G F F+ RP+  +L+  Y  VG++G AI+ LT+++KLV +PL++ +Y SM
Sbjct: 338 LPRFVYAIDWGMFWFLTRPIFWILENVYGLVGSFGVAILALTVIVKLVMFPLANNAYASM 397

Query: 373 EQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQAL 432
            +M+ LQP + ++++K  DD +K  +E M LY+  K+NP  GCLP+++QIPVF+ LY+ L
Sbjct: 398 SKMRNLQPKMEEIKKKFKDDPQKQQQETMALYQREKINPVAGCLPLVLQIPVFYALYKVL 457

Query: 433 LNAIELRHAPFIAHVPFTDIVWLADLSAKDPFYV-------------TPLV--------- 470
              IE+RH PF+         ++ DLSA+DP  +              PL+         
Sbjct: 458 TVTIEMRHQPFLG--------FIHDLSARDPSSIWNLFGLIPWDPAMAPLIGGLLAGPLH 509

Query: 471 -------MGATMFLQQKLTPPAGDPTQAKVMMFMPVVFTFLFLNFPSGLVVYWLCNNVLS 523
                   G TM+LQ  + PPA DP Q ++  FMP++FTF+   F +GL++YW  +N+L+
Sbjct: 510 LGLLAIAYGLTMWLQTAMNPPAADPVQRQIFQFMPLLFTFIMAPFAAGLLIYWAWSNILT 569

Query: 524 IAQQWWILRK 533
           I QQ+ I+ +
Sbjct: 570 ILQQYVIMHR 579