Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 599 a.a., preprotein translocase 60 kD membrane subunit from Agrobacterium fabrum C58

 Score =  253 bits (646), Expect = 1e-71
 Identities = 190/593 (32%), Positives = 278/593 (46%), Gaps = 80/593 (13%)

Query: 2   ENKRAIIAVVLSFIVLVGWGYLSEYMG------WTPKSVPATEQKTAASAPAPSVVTSAP 55
           +N+   IA+ LS ++++ W +L  YM          +     +Q+T    PAP     A 
Sbjct: 3   KNRNYFIAIALSVVIVLAWQFL--YMNPRIEQQRRAEEARQAQQQTTQQQPAPGAAPGAT 60

Query: 56  -EAVTPAP---AFSPSTGHE-------VTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDR 104
            E   PA    A + +T  E       V + T      ++  G       L  YH  +D 
Sbjct: 61  VEGAPPASSTQAAATATREEAIARTQRVAIDTNAIAGSINLTGARFDDIRLKGYHETVD- 119

Query: 105 DAAPVNLIESSAIR----VAPLGLL----VNGQPSWNTGQWAFEGGDLNLADGQTGTLRF 156
           D++P+  + S A         LG +    V G P   T  W    GD  L +    TL +
Sbjct: 120 DSSPIITLFSPADTKDGYFTELGYVAAQEVGGVPGPTT-VWTLASGD-KLTETTPVTLTY 177

Query: 157 VGSVDGLRVVRELEFHADSYLVTEKLHLAPEGDAPRTARVGF-TLG--TTSLTPGESQYN 213
             S     VV       D + +   L +A + + P  A + F T G  T +  P      
Sbjct: 178 TNSKG---VVFSRTVSIDEHYM---LSIADKVENPGQAAISFATYGRVTRNNKPVIPPVF 231

Query: 214 LTRVAWFA----DGSFSEKSSTGDLEKGVLIDGSID-WAGVMSNYFLAAVAPKDTRA--V 266
           +    +      DGS +EK      E+ V +  +   W G+   Y+ AA+ P  T     
Sbjct: 232 VIHEGFLGVSGKDGSLTEKKYKDVEEEPVTVAKATGGWLGITDKYWAAAIVPPQTTPFET 291

Query: 267 LKGKLEGGV--YRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKA----- 319
               + G    Y+   +     V  G S  +    + G KE  L++              
Sbjct: 292 RYSHITGNQPSYQADFKSDSMTVEAGQSIELKSLVFAGAKEVPLVDRYETEYSVPKFDLL 351

Query: 320 IDLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQ 379
           ID GWF FI +P+  ++DFF++Y GN+G AI+L TI++K +F+PL+ K Y SM  MK++Q
Sbjct: 352 IDWGWFYFITKPMFKMMDFFFRYFGNFGVAILLTTIVVKALFFPLASKQYASMANMKRMQ 411

Query: 380 PMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELR 439
           P + +++ KH DDR  M + MM+LYK  K+NP  GC PML+QIPVFF LY+ +   IE+R
Sbjct: 412 PKMEELKAKHGDDRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMR 471

Query: 440 HAPFIAHVPFTDIVWLADLSAKDP-------------------FYVTPLVMGATMFLQQK 480
           HAPF          W+ DLSA DP                     V PLVMG TMFLQ +
Sbjct: 472 HAPFFG--------WIHDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPLVMGITMFLQMR 523

Query: 481 LTPPAGDPTQAKVMMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWILRK 533
           + P   DPTQA +  +MP++FTF+  +FP+GLV+YW  NN LSI+QQ  I+++
Sbjct: 524 MNPTPPDPTQAMIFTWMPLIFTFMLASFPAGLVIYWAWNNTLSISQQALIMKR 576