Pairwise Alignments

Query, 524 a.a., branched chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  310 bits (795), Expect = 6e-89
 Identities = 198/495 (40%), Positives = 279/495 (56%), Gaps = 25/495 (5%)

Query: 35  VRLEGIGKSFGPVRANHDITLDIVPGRIKALLGENGAGKSTLMSILSGRLAQDTGIIHVD 94
           + L GI K FGPV+  H + L   PGR+  LLGENGAGKSTLM IL+G      G + V+
Sbjct: 8   IELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEGALQVN 67

Query: 95  GEAVRFRSPKDALKAGIGMVYQHFMLVDSMTVAENVLLG----QSGAWLSPVHMSRVVAE 150
           G AVRF  P+ A   GI +++Q F L + +TVA+N+ LG    + G WL    M      
Sbjct: 68  GRAVRFDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAMRATARR 127

Query: 151 LAARYGL-DIDPAARVCDLSMGERQRVEILKLLYRDSRVLILDEPTAVLTPGETEQLFEA 209
           +    GL  + P  RV DL + ERQ VEI K L R +RVLI+DEPTA LTPGET +LFE 
Sbjct: 128 VLDDVGLAKVHPDTRVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGRLFEL 187

Query: 210 LHRMAENGKAIVFISHKMQEVLALADEIAILRRGEVVDEFHESEVPGEAELANRMVGREV 269
           + R+  +G  +VFISHK+ EV  + +E+ ++R G +V +   +     A++AN MVGRE+
Sbjct: 188 VARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVAQ-QATATLTRAQMANLMVGREL 246

Query: 270 I------LEVAAE-PLEPGDRVLHVDGLAGDGLKGLSFEVRKGEVFAIAGVAGNGQRELV 322
                   EV A+ P+    R L V G A D    +SFEVR GEVF  AG+ G G+ EL 
Sbjct: 247 ADLYPPRTEVPADAPVLLSVRALSVPGWAQD----VSFEVRAGEVFGFAGLVGAGRTELF 302

Query: 323 ECVTGLRRPAEGEVELLGIPWRQFFTKAPRQ---GGLAYIPEDRQGLATCLSLDLVDNFL 379
           E + GLR      V++ G   R    ++PR+    GL Y+ EDR+G    +   L +N  
Sbjct: 303 EGLLGLRERRAQAVQVAG---RALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLT 359

Query: 380 LTARGCFTRGPFLDRKSADAAARDILAEYNVQPGRAEAPARSLSGGNLQKLVVGREFYRK 439
           L A     R P+L   S  AA    + E+ ++ G  + PA SLSGGN QKL + +  +  
Sbjct: 360 LMALQRHAR-PWLQPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPD 418

Query: 440 PSLIVAENPTQGLDIAATEEVWARLLEV-RSHAGVLLVSGDLNEVLALADRVAVMYRGCF 498
           P ++V + PT+G+DI A  +++A +  +  S   V+++S +L E++ L  RVAVM  G  
Sbjct: 419 PRVVVLDEPTRGVDIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRL 478

Query: 499 IGLLDRSDTNKVDAI 513
              L  +D N+ + I
Sbjct: 479 QATLSAADLNEQELI 493