Pairwise Alignments

Query, 524 a.a., branched chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 501 a.a., D-ribose ABC transporter ATPase from Escherichia coli BL21

 Score =  287 bits (735), Expect = 6e-82
 Identities = 168/485 (34%), Positives = 273/485 (56%), Gaps = 13/485 (2%)

Query: 34  VVRLEGIGKSFGPVRANHDITLDIVPGRIKALLGENGAGKSTLMSILSGRLAQDTGIIHV 93
           +++L+GI K+F  V+A     L++ PGR+ AL+GENGAGKST+M +L+G  A+D G +  
Sbjct: 4   LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGTLLW 63

Query: 94  DGEAVRFRSPKDALKAGIGMVYQHFMLVDSMTVAENVLLGQSGA-WLSPVHMSRVVAE-- 150
            G+   F  PK + +AGIG+++Q   L+  +T+AEN+ LG+        +    + AE  
Sbjct: 64  LGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123

Query: 151 -LAARYGLDIDPAARVCDLSMGERQRVEILKLLYRDSRVLILDEPTAVLTPGETEQLFEA 209
            L A+  L       V DLS+G++Q VEI K+L  +S+V+I+DEPT  LT  ETE LF  
Sbjct: 124 KLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV 183

Query: 210 LHRMAENGKAIVFISHKMQEVLALADEIAILRRGEVVDEFHESEVPGEAELANRMVGREV 269
           +  +   G+ IV+ISH+M+E+  + D++ + R G+ + E   + +  E  L   MVGR++
Sbjct: 184 IRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLT-EDSLIEMMVGRKL 242

Query: 270 ILEVAAEPLEPGDRVLHVDGLAGDGLKGLSFEVRKGEVFAIAGVAGNGQRELVECVTGLR 329
             +       PGD  L VD L G G+  +SF +RKGE+  ++G+ G G+ EL++ + G  
Sbjct: 243 EDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGAL 302

Query: 330 RPAEGEVELLGIPWRQFFTKAPRQG---GLAYIPEDRQGLATCLSLDLVDNFLLTARGCF 386
               G V L G    +  T++P+ G   G+ YI EDR+     L + + +N  LTA   F
Sbjct: 303 PRTSGYVTLDG---HEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYF 359

Query: 387 TR-GPFLDRKSADAAARDILAEYNVQPGRAEAPARSLSGGNLQKLVVGREFYRKPSLIVA 445
           +R G  L       A  D +  +NV+    E     LSGGN QK+ + R    +P +++ 
Sbjct: 360 SRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLIL 419

Query: 446 ENPTQGLDIAATEEVWARLLEVRSHA-GVLLVSGDLNEVLALADRVAVMYRGCFIGLLDR 504
           + PT+G+D+ A +E++  + + ++    ++LVS ++ EVL ++DR+ VM+ G   G   R
Sbjct: 420 DEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTR 479

Query: 505 SDTNK 509
               +
Sbjct: 480 EQATQ 484



 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 63/221 (28%), Positives = 113/221 (51%), Gaps = 10/221 (4%)

Query: 51  HDITLDIVPGRIKALLGENGAGKSTLMSILSGRLAQDTGIIHVDGEAVRFRSPKDALKAG 110
           +D++  +  G I  + G  GAG++ LM +L G L + +G + +DG  V  RSP+D L  G
Sbjct: 269 NDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANG 328

Query: 111 IGMVYQHFM---LVDSMTVAENVLL------GQSGAWLSPVHMSRVVAELAARYGLDIDP 161
           I  + +      LV  M+V EN+ L       ++G  L      + V++    + +    
Sbjct: 329 IVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPS 388

Query: 162 AARVCDL-SMGERQRVEILKLLYRDSRVLILDEPTAVLTPGETEQLFEALHRMAENGKAI 220
             +   L S G +Q+V I + L    +VLILDEPT  +  G  +++++ +++   +G +I
Sbjct: 389 MEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSI 448

Query: 221 VFISHKMQEVLALADEIAILRRGEVVDEFHESEVPGEAELA 261
           + +S +M EVL ++D I ++  G +  EF   +   E  +A
Sbjct: 449 ILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMA 489