Pairwise Alignments

Query, 224 a.a., cytochrome c-type biogenesis protein CcmC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 253 a.a., ABC transporter, membrane spanning protein (heme) from Agrobacterium fabrum C58

 Score =  111 bits (278), Expect = 1e-29
 Identities = 61/175 (34%), Positives = 91/175 (52%), Gaps = 6/175 (3%)

Query: 5   WLAPL-ALAAGAGLAVCQYLIYVYAPVESMMGLVQKIFYTHLPLAWWSFVSFFTVFIASI 63
           WLA L AL   AGL    YL +     +   G   +I Y H+P AW + + +  + +++I
Sbjct: 30  WLAGLTALVLAAGL----YLSFT-TDGDYQQGYTVRIMYVHVPSAWLAMMCYSVMAVSAI 84

Query: 64  AFLRTRDRRWDSLAGAAAEVGVLCSGLALVTGSIWGRHSWGVWWTWDPRLTTTLVMWFVY 123
             L  R    D    AAA +G   + +AL+TGS+WG+  WG WW WD RLT+  V++ +Y
Sbjct: 85  GTLVWRHPLADVSHKAAAPIGAAFTLIALITGSLWGKPMWGTWWVWDARLTSVFVLFLMY 144

Query: 124 AGYLVLRSMNLSRDRQATVSAVVGIAAFVDVPLVFLSARLWRSIHPAVFASRDGG 178
            G + L        R A VSAV+ +  FV++P++  S   W ++H      R GG
Sbjct: 145 LGLIALNRAMDDPSRAARVSAVLILVGFVNIPIIKFSVEWWNTLHQPASVIRMGG 199