Pairwise Alignments

Query, 541 a.a., ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 364 a.a., pseudouridine synthase, RluA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  190 bits (483), Expect = 7e-53
 Identities = 124/314 (39%), Positives = 181/314 (57%), Gaps = 26/314 (8%)

Query: 17  LTVPAGMRNERLDRFLGEALSHTDLSREKIKRAIRDGQCTVDGTVCTTPSTRLRSGQ--R 74
           + V  G    R+D+FL + +++  ++R K+++AI +GQ  ++G+  T  + +++ G    
Sbjct: 41  IAVDKGQAATRVDKFLTDKVAN--VTRNKVQQAIDNGQVKINGSN-TKANYKIKPGDVIT 97

Query: 75  VELAIAPAATAVEPEEGDLTIIHRDEHLLVIDKPAGLTVHPCPSCPEGTLVHRLVHHFDA 134
           V L + P  T V PE+ DL I+H D+HLLV++KPAG+ VHP      GTLV+ LV+HF  
Sbjct: 98  VVLEMEPRETEVLPEKLDLDIVHEDDHLLVVNKPAGMVVHPAYGNWTGTLVNGLVYHFSQ 157

Query: 135 LRAQEG--FRPGIVHRIDKDTSGLLLVALSEGVRLKLSEAFAERTVEKEYLALVHGVPPA 192
           L    G   RPG+VHRIDKDTSGLL++A SE     L++ F + ++E+ Y+ALV G P  
Sbjct: 158 LPEMPGNSGRPGLVHRIDKDTSGLLVIAKSEQAMTGLAKQFFDHSIERTYIALVWGEPQE 217

Query: 193 -TGEVDAPIGRHPTHKVRMAVV---KGGKPARSEWRVLHAAPEGHYALVAVRIHSGRTHQ 248
             G +DA +GR    +  M V      GK A + W+VL      + +LV   + +GRTHQ
Sbjct: 218 DAGTIDAHVGRSARDRKVMDVFPEGDQGKNAVTHWKVLKRL--RYVSLVQCNLETGRTHQ 275

Query: 249 IRVHMAHAGFPLWGDQLYGPGTPARLREQ--GYGA----------RQMLHAWHLAFTHPV 296
           IR HM + G PL+ D +YG G   R   Q   Y A          RQ LHA  L F+HP+
Sbjct: 276 IRAHMKYLGHPLFNDAVYG-GDKIRKGTQFSKYKAFVNNCFKLLPRQALHAKSLGFSHPI 334

Query: 297 TGERLRFTCPPPQD 310
           + + L+FT   P+D
Sbjct: 335 SQDFLQFTSNLPED 348