Pairwise Alignments

Query, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 553 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 84.7 bits (208), Expect = 7e-21
 Identities = 78/409 (19%), Positives = 175/409 (42%), Gaps = 11/409 (2%)

Query: 36  TKLKDSVLSTINSNPKLKVFQENREAATHDLRRARAGWLPRVDVRAGYGAEQYS-DTTSR 94
           T +   V S ++++P++   +    AA   ++ A   W P +++    G E+Y  D T  
Sbjct: 28  TSISAEVSSLLDTHPRIASARHEMNAAAQQVKEAVGKWFPDLELTEDAGRERYHRDATKN 87

Query: 95  QSNKDDEFTERGDASAVLTQTVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGLDAVLA 154
                 +   R      LTQ +WD   T++ +   + +  +A          +  DAVL+
Sbjct: 88  TVASFHQLDVR------LTQKIWDFGKTNADIRAAEYRWKAAKENFRAAEHTIIYDAVLS 141

Query: 155 HIEVLRQREIVRLSEINVQQHQTILGSQSERQKMGVASIADVTQTQGRLARAQSTLVESR 214
           ++ +++   I+  S+ + +  +     +S     G     DV Q + +L+ A++  V + 
Sbjct: 142 YLNLMKSYRILDYSKKSEENIKRQANLESAMVVSGRGYQTDVLQAKAQLSGAEARRVRAE 201

Query: 215 SALEVAEAAYKRLTGMEVPTELERA---GIPDTAPASFETALGASLTANPKIAAYQSDIQ 271
             ++ A + Y+ +   + P E + A      +    S E A+ A+L  NP++A+ +   +
Sbjct: 202 GVIDQAVSHYQAVFLRDPPAESQMALPRSPDEKLYRSREQAIEAALRQNPQLASARMTSR 261

Query: 272 AARGQE-DLDKSRFHPNVYLEVGPSYKERVESSESYAWGTTAMMRVNWNIYDGGADVAAV 330
           +A+     +   ++ P V   V  ++K  V     Y     A +++++    G   + +V
Sbjct: 262 SAKETALSVAADKYTPVVKGIVESTHKNNVAGLMGYQSDQVAKVQISFPFNLGFTAMNSV 321

Query: 331 RGSAARVRQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQQF 390
             +      +  +   +  +L E+ +  +       + +       T + Q  +   ++ 
Sbjct: 322 SAAVETHSATVAKEGTVRISLEEQVKGLFKNLDVQKKNAGLLHNQATLSEQFLEMAREER 381

Query: 391 LVGQRSLLDVLDAENELYSSEVQLVTAKANEAGTAYRLLALGGNLLASL 439
            + +RSL+D+L  E +LY++E    +A  +   + + LL   G+L + L
Sbjct: 382 KINRRSLIDILQGETQLYNAESDAYSADIDVIISTFALLQATGDLTSDL 430