Pairwise Alignments

Query, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 531 a.a., outer membrane protein from Magnetospirillum magneticum AMB-1

 Score =  120 bits (302), Expect = 8e-32
 Identities = 91/402 (22%), Positives = 184/402 (45%), Gaps = 6/402 (1%)

Query: 38  LKDSVLSTINSNPKLKVFQENREAATHDLRRARAGWLPRVDVRAGYGAEQYSDTTSRQSN 97
           L+D +   + +NP+++   +   +A   +R ARAG+LP V +    G E Y D+  R+  
Sbjct: 36  LEDEMRELVATNPQIQAKMKGVNSADEGIRVARAGYLPTVKLSGDQGHE-YIDSPDRRGT 94

Query: 98  KDDEFTERGDASAV-LTQTVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGLDAVLAHI 156
           +   F ++ + S + +TQ ++DGFAT S V+  K+    +++ L    +A  L+  +A++
Sbjct: 95  QGKPFMDKRNTSGLTVTQKIFDGFATDSTVESAKSTRRISESDLRATRQATLLEGAIAYL 154

Query: 157 EVLRQREIVRLSEINVQQHQTILGSQSERQKMGVASIADVTQTQGRLARAQSTLVESRSA 216
           +V+R  ++V LS  N ++       + ER + G    +DV Q + RL  A+   V     
Sbjct: 155 DVMRTTKLVALSRENERKVAEQQNLEDERVQKGSGIASDVLQAKQRLQLAKERRVNYEGE 214

Query: 217 LEVAEAAYKRLTGMEVPTELERAGIP---DTAPASFETALGASLTANPKIAAYQSDIQAA 273
              A A + ++ G   P     +  P   D  P + + +L A+   NP + +  S I  +
Sbjct: 215 FHAAVARFTQVFG-HAPDVASLSDPPLPLDLIPETLDQSLEAAEKDNPTLESASSSIVLS 273

Query: 274 RGQEDLDKSRFHPNVYLEVGPSYKERVESSESYAWGTTAMMRVNWNIYDGGADVAAVRGS 333
             + ++ ++ ++P + L     Y+    ++       + M+  +W ++ G    A+V  +
Sbjct: 274 GEKRNIAEAGYYPTLDLVGKADYEHGKNATVGVRRDWSLMLVASWELFSGFKTDASVAQA 333

Query: 334 AARVRQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQQFLVG 393
           +     S+    +      E+TR  W +  +A ++      A     +     M++   G
Sbjct: 334 SWDHGVSKDNRYHTSRKTAEQTRTAWHKIQTARQRLDLLENAAVLAEEVWAATMKKRDAG 393

Query: 394 QRSLLDVLDAENELYSSEVQLVTAKANEAGTAYRLLALGGNL 435
           + ++ +VLD E  +  + +    A  +    +Y L+AL G L
Sbjct: 394 KATVTEVLDEETRINEARINYTGAYYSMYQASYELIALMGRL 435