Pairwise Alignments

Query, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 457 a.a., type I secretion outer membrane protein, TolC family from Kangiella aquimarina DSM 16071

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 103/454 (22%), Positives = 188/454 (41%), Gaps = 31/454 (6%)

Query: 1   MKSSICKKMITGATACALISASGAFLSLPDVSFAETKLKDSVLSTINSNPKLKVFQENRE 60
           MK +   K++T     A++S SG        S A T L +     + ++P+ K+ + N  
Sbjct: 1   MKPTTTIKLVT----LAVLSLSGFS------SQANTDLLEVYQDALKNDPQYKISEANLR 50

Query: 61  AATHDLRRARAGWLPRVDVRAGYGAEQYSDT-TSRQSNKDDEFTERGDASAVLTQTVWDG 119
           A    +R +R+  LP+V   A  G   Y  +      +  D F+   D++    Q     
Sbjct: 51  ATEQGVRISRSSLLPQVSASATKGMSDYDYSGQGLDGSPSDPFSNEVDSTTYRVQLSQSL 110

Query: 120 FATSSRVDVGKAKLDSADNRLMDNAEALGL--DAVLAHIEVLRQREIVRLSEINVQQHQT 177
           F  S  V + +A+L      L   A    L      A+ + L ++E++  +    +  Q 
Sbjct: 111 FDWSRWVALEQAELRVRAAELSHAASLQDLMTRTAQAYFQTLSRKEVLEATRSEKEALQQ 170

Query: 178 ILGSQSERQKMGVASIADVTQTQGRLARAQSTLVESRSALEVAEAAYKRLTGMEVPTELE 237
            L    E+ + G++S  D    Q    +AQ + + + +    A  A + +TG +  +ELE
Sbjct: 171 QLDLTREQFESGLSSATDFLDAQANFDQAQVSELVAENEYTNAVEALREITG-QYYSELE 229

Query: 238 RAG----IPDTAPASFETALGASLTANPKIAAYQSDIQAARGQEDLDKSRFHPNVYLEVG 293
            AG    +    PA+ +  + A+  AN  + A Q D++ AR +   +KS  +P   L V 
Sbjct: 230 AAGNEVTLTPPTPANIDDWMRAAREANLSLKAKQFDVRVAREEVKRNKSGHYPTADLNVT 289

Query: 294 PSYKERVESSESYAWGTTAMMRVNWNI-YDGGADVAAVRGSAARVR-QSRQELQNLLDTL 351
            S +E  E+   +         +N    Y  G  V     S  R   ++ Q  QN L T 
Sbjct: 290 YSDQE-TETDRFFPIQNIDQNTLNMQDGYQAGITVTIPLFSGFRTSAETEQSKQNYLRTT 348

Query: 352 NE----------ETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQQFLVGQRSLLDVL 401
           +E            R  ++   ++ +       A   +  + ++  + +  G R+++DVL
Sbjct: 349 HELDQSDRLVQKNARMAYTNLQTSIKSFEANKRAYESSINSLESTQEGYQAGTRNIVDVL 408

Query: 402 DAENELYSSEVQLVTAKANEAGTAYRLLALGGNL 435
            A    YS++  ++ AK +   ++ +L A  G L
Sbjct: 409 IATRSAYSAQRNMIRAKYDYLISSLQLKAAAGTL 442



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 42/186 (22%), Positives = 69/186 (37%), Gaps = 14/186 (7%)

Query: 267 QSDIQAARGQEDLDKSRFHPNVYLEVGPS--YKERVESSESYAWGTTAMMRVNWNIYDGG 324
           Q    A +G  D D S       L+  PS  +   V+S       TT  ++++ +++D  
Sbjct: 66  QVSASATKGMSDYDYS----GQGLDGSPSDPFSNEVDS-------TTYRVQLSQSLFDWS 114

Query: 325 ADVAAVRGSAARVRQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVTYNTQTRD 384
             VA +  +  RVR +       L  L   T   + + LS  E      +      Q  D
Sbjct: 115 RWVA-LEQAELRVRAAELSHAASLQDLMTRTAQAYFQTLSRKEVLEATRSEKEALQQQLD 173

Query: 385 TYMQQFLVGQRSLLDVLDAENELYSSEVQLVTAKANEAGTAYRLLALGGNLLASLSIDRS 444
              +QF  G  S  D LDA+     ++V  + A+         L  + G   + L    +
Sbjct: 174 LTREQFESGLSSATDFLDAQANFDQAQVSELVAENEYTNAVEALREITGQYYSELEAAGN 233

Query: 445 ELRNVP 450
           E+   P
Sbjct: 234 EVTLTP 239