Pairwise Alignments

Query, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 511 a.a., TolC family outer membrane protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  124 bits (310), Expect = 9e-33
 Identities = 106/444 (23%), Positives = 200/444 (45%), Gaps = 24/444 (5%)

Query: 8   KMITGATACALISASGAFLSLPDVSFAETKLKDSVLSTINSNPKLKVFQENREAATHDLR 67
           +++  A   A+++  GA       ++AET L+D++     +NP L   + N+ A    + 
Sbjct: 6   RVLASAAVVAVMTGLGA------PAWAET-LQDAIALAYRTNPNLLAQRANQRALDETVV 58

Query: 68  RARAGWLPRVDVRAGY--------GAEQYSDTTS-----RQSNKDDEFTERGDASAVLTQ 114
           +AR+G  P +   AG            Q+ DT        Q       TE  +    ++Q
Sbjct: 59  QARSGLRPTIGASAGVDYTRSDFPAVTQFVDTNGDGIPDTQVKTSSSETEGANVGVSVSQ 118

Query: 115 TVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGLDAVLAHIEVLRQREIVRLSEINVQQ 174
            VW    TS  +D  +A + +    L +  +++ L  + A++ V R  EI+R+ + N+  
Sbjct: 119 NVWTAGRTSRAIDQARASVLAGRENLREIEQSVMLSVIQAYVNVTRDMEILRIRQENLTV 178

Query: 175 HQTILGSQSERQKMGVASIADVTQTQGRLARAQSTLVESRSALEVAEAAYKRLTGMEVPT 234
            Q  L   S R ++G  +  DV Q +   A++++ L  +++ L  + AAY  + G   P 
Sbjct: 179 LQRQLEETSARFEVGEITRTDVAQAEASQAQSEADLANAQAQLSTSRAAYAAVVGQS-PA 237

Query: 235 ELERAGIPDTAPASFETALGASLTANPKIAAYQSDIQAARGQEDLDKSRFHPNV--YLEV 292
           +LE A +    P+ F+ A+  +L  NP + A    +Q+A       +S + P+V      
Sbjct: 238 DLEAAPVLPEVPSDFDVAIETALQRNPAVLAATYQLQSAEAAVAAARSEYLPSVRATASY 297

Query: 293 GPSYKERVESSE-SYAWGTTAMMRVNWNIYDGGADVAAVRGSAARVRQSRQELQNLLDTL 351
           G S  +  +  E +     TA   ++  ++ GG + + V  +  R   ++  ++    T+
Sbjct: 298 GGSTNDLGDLGELADRRSFTAGATLSVPLFTGGLNRSRVAQALERANAAQIGIEGERRTV 357

Query: 352 NEETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQQFLVGQRSLLDVLDAENELYSSE 411
            +   + +++ LS     +  T AV   +   +   Q+  VG R+ LDVL+ E  L +++
Sbjct: 358 LQNVSSAYAQVLSTRATVAAGTEAVRAASVAAEGVRQEAQVGLRTTLDVLNQELALRNAQ 417

Query: 412 VQLVTAKANEAGTAYRLLALGGNL 435
             + +A+A E      LLA  G L
Sbjct: 418 TSVASARAAEYVARASLLAAMGQL 441