Pairwise Alignments

Query, 328 a.a., dnaJ domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 306 a.a., molecular chaperone DnaJ from Magnetospirillum magneticum AMB-1

 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 4   RDCRRILQVDDRAALDDVKRSYRRLAFALHPDLNPDKPDAARRFRQLNEAYVLLTRLYE- 62
           +D   +L V   A+ DD+K++YR LA  LHPDLNP    A  RF+ ++ AY  L+   + 
Sbjct: 2   KDPYLVLGVARTASDDDIKKAYRALARELHPDLNPGDAKAESRFKDISAAYDFLSDSTKR 61

Query: 63  -ERGASQSRKAGPASGGAAGARPGAARDGKGRPAHRDDTAPPHAGQARQAGQGTTTSAGE 121
            +  A +    G    GA  +RPG AR G G             G   + G G     G 
Sbjct: 62  AQFDAGEIDATGSPKRGAWRSRPG-ARPGPG-------------GGGPRGGFG-----GF 102

Query: 122 SRRSGPTPGESGRDARQGARPAGAGERPGTGGAQHTREATSPDGSTSG 169
                    E  R  ++    A A  RP  G  +HT   +  D +  G
Sbjct: 103 GENVDDIMAELFRRKQKAQSQAHAKARPRGGDVRHTLTISFLDAAAGG 150



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 257 DEEQTIHLPAANLLPGGRVRLQIRQGLSDEVRTVEMTLPPDFVVGRPLRLKGLGKRI--G 314
           D   T+ +   +   GG  R+ +  G     RTVE+ +PP    G+ LRLKG G     G
Sbjct: 134 DVRHTLTISFLDAAAGGTKRVTLMSG-----RTVEVRIPPGSQDGQTLRLKGQGHGADDG 188

Query: 315 PWQGDLYLRL 324
              GD ++ +
Sbjct: 189 AVPGDAFIEI 198