Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 467 a.a., HD domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  119 bits (298), Expect = 2e-31
 Identities = 64/145 (44%), Positives = 89/145 (61%)

Query: 220 IDSRSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGP 279
           I+ R P+TA H   VAE A  +  + GL  +  + + VAG +HDIGK+G+P  +L +PG 
Sbjct: 285 IEVRDPYTAGHQRRVAEIAVAIGRQLGLPAETLKGLRVAGTIHDIGKIGIPAEMLTRPGR 344

Query: 280 LDAAEMCEMQLHAGRSKTILDAVPGFDEVSRWGALHHERLDGSGYPFGLRGDELEVPSRI 339
           L A E   ++ H+     IL+ V     ++     HHER+DGSGYP GL+GDE+   +RI
Sbjct: 345 LSALEFDIIRNHSADGCEILNGVDFPWPIADMVRHHHERMDGSGYPDGLKGDEILFEARI 404

Query: 340 IAVADVFTAIAEDRPYRRGMPLETA 364
           +AVADV  AIA DRPYR  + L+ A
Sbjct: 405 LAVADVVEAIASDRPYRAALGLDAA 429



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 17/113 (15%)

Query: 13  AFSRALDHVSRAVSD-----------HHIHVGYFAARLGERLGLDARDRCELLLSALLHD 61
           A  RAL+    AV+            H   V   A  +G +LGL A     L ++  +HD
Sbjct: 269 ALERALEGTIEAVASTIEVRDPYTAGHQRRVAEIAVAIGRQLGLPAETLKGLRVAGTIHD 328

Query: 62  VGAISLKTGL---DGLLFEQNADA---HARAGWALIGTCPRLAAAGEVVLHHH 108
           +G I +   +    G L     D    H+  G  ++          ++V HHH
Sbjct: 329 IGKIGIPAEMLTRPGRLSALEFDIIRNHSADGCEILNGVDFPWPIADMVRHHH 381