Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 428 a.a., HD-GYP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 13/228 (5%)

Query: 198 RLEEEILDTEGVISFSNLFSL-----VIDSRSPFTATHSSGVAETARLLAMRAGLGHDVA 252
           RL   +++    +  +NL ++      I  R   T++H+  V   A  LA    L     
Sbjct: 200 RLNRSLVERSRSLLHANLGAIEMLGNAIAKRDSDTSSHNYRVTLYALRLAEALRLDAAHI 259

Query: 253 QKVFVAGLLHDIGKLGVPLSILEKPGPLDAAEMCEMQLHAGRSKTILDAVPGFDEVSRWG 312
           + +     LHD+GKL +P +IL KPG LD AE   M+ H      ++       + +   
Sbjct: 260 RSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEFAIMKTHITHGLDLVQRFAWLKDAAAVV 319

Query: 313 ALHHERLDGSGYPFGLRGDELEVPSRIIAVADVFTAIAEDRPYRRGMPLETACGVL---R 369
             HHE+ DGSGY  GL GD++ + +RI A+ADVF A+   RPY+   P+  A  ++   R
Sbjct: 320 GHHHEKYDGSGYMAGLAGDQIPLAARIFAIADVFDALTSKRPYKEAFPVAQATAIMAAGR 379

Query: 370 GQVRDGLLDG---DLAGLLLNDID--EADCARRKAQARARSSFDEAYD 412
           G   D  L G    +AG L  +    E D  +   + R    F+EA +
Sbjct: 380 GSHFDPALLGLFFSMAGDLYGEFGGREDDGLKHTLRVRTLHYFEEALE 427



 Score = 51.6 bits (122), Expect = 5e-11
 Identities = 55/166 (33%), Positives = 67/166 (40%), Gaps = 17/166 (10%)

Query: 26  SDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDVG------AISLKTG-LDGLLFEQ 78
           S H+  V  +A RL E L LDA     LL  A LHDVG      AI LK G LD   F  
Sbjct: 235 SSHNYRVTLYALRLAEALRLDAAHIRSLLKGAFLHDVGKLAIPDAILLKPGKLDDAEF-A 293

Query: 79  NADAHARAGWALIGTCPRLAAAGEVVLHHHAAWED-------VADDLDRAKRLGAIVHLA 131
               H   G  L+     L  A  VV HHH  ++          D +  A R+ AI  + 
Sbjct: 294 IMKTHITHGLDLVQRFAWLKDAAAVVGHHHEKYDGSGYMAGLAGDQIPLAARIFAIADVF 353

Query: 132 DRLDVQLRRSEPLAPQLTRAFTKLEPGRGRLFSPEHLDALRDMLDD 177
           D L    +R    A  + +A   +  GRG  F P  L     M  D
Sbjct: 354 DAL--TSKRPYKEAFPVAQATAIMAAGRGSHFDPALLGLFFSMAGD 397