Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 349 a.a., response regulator from Magnetospirillum magneticum AMB-1

 Score =  118 bits (296), Expect = 2e-31
 Identities = 64/153 (41%), Positives = 87/153 (56%)

Query: 217 SLVIDSRSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEK 276
           SL ++ R P+T  H   VA+ +  +  R GL   V + +   GLLHDIGK+ +P   L +
Sbjct: 162 SLTLEMRDPYTTGHQRRVAQLSTAIGQRMGLSEAVVEGLRTGGLLHDIGKIHIPAEFLSR 221

Query: 277 PGPLDAAEMCEMQLHAGRSKTILDAVPGFDEVSRWGALHHERLDGSGYPFGLRGDELEVP 336
           PG L A     +++H      I+  +     V+     HHERLDGSGYP GL+GDE+ + 
Sbjct: 222 PGKLSAEVHKVIRMHPQMGWEIMKDIEFPWPVADMIRQHHERLDGSGYPLGLKGDEIILE 281

Query: 337 SRIIAVADVFTAIAEDRPYRRGMPLETACGVLR 369
           SRIIAVADV  AI+  RPYR  + L+ A   LR
Sbjct: 282 SRIIAVADVLEAISSHRPYRPALGLDVAVAELR 314



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 41/193 (21%), Positives = 73/193 (37%), Gaps = 11/193 (5%)

Query: 7   LIDLVVAFSRALDHVSRAVSDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAIS 66
           L+  V + S  L+      + H   V   +  +G+R+GL       L    LLHD+G I 
Sbjct: 154 LLQTVRSLSLTLEMRDPYTTGHQRRVAQLSTAIGQRMGLSEAVVEGLRTGGLLHDIGKIH 213

Query: 67  LKTGLDGLLFEQNADA------HARAGWALIGTCPRLAAAGEVVLHHHAAWEDVADDL-- 118
           +         + +A+       H + GW ++          +++  HH   +     L  
Sbjct: 214 IPAEFLSRPGKLSAEVHKVIRMHPQMGWEIMKDIEFPWPVADMIRQHHERLDGSGYPLGL 273

Query: 119 --DRAKRLGAIVHLADRLD-VQLRRSEPLAPQLTRAFTKLEPGRGRLFSPEHLDALRDML 175
             D       I+ +AD L+ +   R    A  L  A  +L    G  + P  + A  +++
Sbjct: 274 KGDEIILESRIIAVADVLEAISSHRPYRPALGLDVAVAELREHSGSRYDPAVVQACIEVV 333

Query: 176 DDPQVREGVEDPS 188
           ++       EDPS
Sbjct: 334 EERGPGILDEDPS 346