Pairwise Alignments

Query, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 452 a.a., sensory box/HDIG domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  103 bits (257), Expect = 1e-26
 Identities = 56/142 (39%), Positives = 77/142 (54%)

Query: 223 RSPFTATHSSGVAETARLLAMRAGLGHDVAQKVFVAGLLHDIGKLGVPLSILEKPGPLDA 282
           R  +TA H   VA  A  +    G+G    + +  A LLHDIGK+ +P  +L KP  L  
Sbjct: 270 RDSYTALHQQRVARLAVAVGQELGMGAASLETLETASLLHDIGKVSIPAEVLVKPVKLTT 329

Query: 283 AEMCEMQLHAGRSKTILDAVPGFDEVSRWGALHHERLDGSGYPFGLRGDELEVPSRIIAV 342
            EM  ++ H  +   +L  VP    V+     HHERLDG+GYP GLRGD +   +RI+ V
Sbjct: 330 LEMALVRSHVEQGWEVLHDVPFSGPVAEVVYQHHERLDGTGYPRGLRGDAILQEARIVTV 389

Query: 343 ADVFTAIAEDRPYRRGMPLETA 364
            DV  A++  RPYR  + +E A
Sbjct: 390 CDVVEAMSSHRPYRPALGVEVA 411



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 23/193 (11%)

Query: 3   LQVRLIDLVVAFSRALDHVSRAVSDHHIHVGYFAARLGERLGLDARDRCELLLSALLHDV 62
           L+  L   V A SRA        + H   V   A  +G+ LG+ A     L  ++LLHD+
Sbjct: 252 LRGALAGTVRALSRAAGLRDSYTALHQQRVARLAVAVGQELGMGAASLETLETASLLHDI 311

Query: 63  GAISLK----------TGLDGLLFEQNADAHARAGWALIGTCPRLAAAGEVVLHHHAAWE 112
           G +S+           T L+  L      +H   GW ++   P      EVV  HH   +
Sbjct: 312 GKVSIPAEVLVKPVKLTTLEMALVR----SHVEQGWEVLHDVPFSGPVAEVVYQHHERLD 367

Query: 113 DVADDLDRAKRLGAIVHLADRLDV-----QLRRSEPLAPQL--TRAFTKLEPGRGRLFSP 165
                  R  R  AI+  A  + V      +    P  P L    A  ++E   G  ++P
Sbjct: 368 GTG--YPRGLRGDAILQEARIVTVCDVVEAMSSHRPYRPALGVEVALAEVERHAGTRYAP 425

Query: 166 EHLDALRDMLDDP 178
           E + ALR +LD P
Sbjct: 426 EVVAALRRVLDTP 438