Pairwise Alignments

Query, 301 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 9/305 (2%)

Query: 1   MPRSAKATGYLCALAATVIWSGNFIVARALADTVPPVTTSFLRWVTALVVILPFGLGAVR 60
           M  S+    Y+   A T+IW G F+  R L+ TV P+  + LR+  A + +L F LG  R
Sbjct: 1   MHSSSDRITYMKLAAVTMIWGGTFVAGRYLSGTVDPLLAASLRFALASLALLGF-LGLAR 59

Query: 61  RDMPLLRAN---LTYFIMAGITGVSVFNTFIYIAGRTTEAINMALIASSSPVWIIILSRI 117
             +PL R +   L    M G  G+  +N   +   ++  A   +LI + +P  I + SR 
Sbjct: 60  --IPLARPSPRQLLQLGMLGFFGIFFYNLCFFYGLQSINASRASLIVALNPAVIGLASRW 117

Query: 118 LLGEAVTLRRAAGVAVSLCG-TLVLVTRGDFTRLASLRFAVGDLWMLAAALTFASYSVLL 176
           L  E +     AG+ + L G  +V+V+R       +     GDL +    + +  YS+  
Sbjct: 118 LFKERLGASNVAGILLCLTGAAVVIVSRNPHVLNEATSSWRGDLLIFGCVVGWGIYSLFS 177

Query: 177 RKKPEGISALGSLTTTFAIG--VVGILPMLAWEWGHGAQLAVTPAVVGAVLYIGIGASLL 234
           R   + +  L ++T +  +G  ++ +  ++   +   A   +  A   ++ Y+G+  S L
Sbjct: 178 RGLNQSLGPLQTVTWSILLGTLMLTLTTLIMGRFTLEAMGRLQTAQGLSLAYLGVLGSAL 237

Query: 235 AYLCWSVAVERIGPAKSALVYYSLPLFSATEAALLLGETITLAHVASCALIVGGILIATM 294
           AY+ +   + RIG  +S +     PL +    ALLL E ++L  +   A+I+ GI +   
Sbjct: 238 AYIGYYDGIRRIGATRSGVFIALNPLTAVICGALLLDEPLSLPMLIGGAVILLGIYLCNK 297

Query: 295 QRAPA 299
             A A
Sbjct: 298 PLARA 302