Pairwise Alignments

Query, 810 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 465 a.a., Sensor protein of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  112 bits (280), Expect = 5e-29
 Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 5/231 (2%)

Query: 569 AERRMLARVNQSERMATVGKLSAGLAHEINNPLGVILCYAELL--RQGATAEQQDDLGII 626
           + R +L  + + E++  +G L+AG+AHEI NPL  I   A+    R  A  E  +   ++
Sbjct: 230 SHRELLDAMKRKEKLVAMGHLAAGVAHEIRNPLSSIKGLAKYFAERTPAGGESHELAQVM 289

Query: 627 LRHTRQAQKVLRDLLDFARPKAFEGVLTDAAGVARRMAEVFGPQAAHRGGRVQVEAEDGL 686
            +   +  +V+ +LL+  +P        +   +      +    A  R  +++  A + L
Sbjct: 290 AKEADRLNRVVSELLELVKPAHLTLQTVNLNDIITHSLNLVSQDAQSREIQLRFTANETL 349

Query: 687 PPARIGEQALEQILSNLLLNAIDALTGEDGLIRIRLRSHGLN-VRIDVEDNGLGVETDAL 745
              +     L Q+L NL LNAI A+ G  G I +  +  G + V I V D+G G+  D L
Sbjct: 350 KRIQADPDRLTQVLLNLYLNAIHAI-GRQGTISVEAKESGTDRVIITVTDSGKGIAPDQL 408

Query: 746 QRVFDPFYTTKETGTGLGLSVVYGIVTDAGGTAEVLQSHELGGAVFRVTLP 796
           + +F P++TTK  GTGLGL+VV  I+   GG  +V +S E  GAVF + LP
Sbjct: 409 EAIFTPYFTTKADGTGLGLAVVQNIIEQHGGAIKV-KSIEGKGAVFTIWLP 458