Pairwise Alignments

Query, 285 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 24/263 (9%)

Query: 26  REVLKLTSDDSRAPANRLAEVVGRDQALSTRLLRMANSAYYGLQSEVPSVQRAVA-VLGM 84
           ++++KL  D + A  + +  VV  D AL+ +++  A S YY    ++ SV+ A+  VLG 
Sbjct: 202 QKIIKLRVDPN-ATIDDITGVVETDPALAAQVVSWAASPYYASPGKIRSVEDAIVRVLGF 260

Query: 85  AEVRALILAVAASGIAGRRNLPATF--DLSGYWRHQLCVAACCRMLAR---RVSPGEADV 139
             V  L L +A   +    +LP       + YW   +  AA    L R   R    EA +
Sbjct: 261 DLVINLALGLA---LGKTLSLPKDHPHQSTPYWHQSIYTAAVIEGLTRAMPRAQRPEAGL 317

Query: 140 LYTAGLLHDIGKLLMAGLCPDAWQAV-QALMAEEHLETAEAEERHWGLDHGVIGARLLSY 198
            Y AGLLH+ G LL+A + P  +  + + L    HL  +  E+   G+    IGA L+ Y
Sbjct: 318 TYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQHLLGISREQIGAWLMRY 377

Query: 199 WDLPPALTEPVNWHHAPQYAGAYERNARLLNLADRLLLMYERGDG---VMPVTL------ 249
           WD+P  L+  + + H P Y G Y     L+ LA RLL     G G    +P  L      
Sbjct: 378 WDMPDELSTALRFQHDPTYDGQYAEYPNLVCLAVRLLRSRGIGSGPDETIPDELLERLGL 437

Query: 250 ----ADDLATFGLDAHVMAADLS 268
               AD++ +  LDA V+  +L+
Sbjct: 438 SRDKADEVVSKVLDAEVLLRELA 460