Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 466 a.a., RtcB family protein from Pectobacterium carotovorum WPP14

 Score =  107 bits (268), Expect = 5e-28
 Identities = 120/439 (27%), Positives = 179/439 (40%), Gaps = 87/439 (19%)

Query: 35  ALTLPPDAI--DDKAWEQIENVLSLD--------CLVRLAIMPDVHAGYDLCIGG-VALL 83
           A  L PD +  ++KA +Q+ +  S+         C  R    PD H G    +G  VA  
Sbjct: 34  AQVLLPDTLPLEEKAVQQLLDFASVHLPGSDARVCAARAT--PDFHPGTLAPVGSIVATT 91

Query: 84  AGTISPGFVGYDIGCGMCHVNTG---RTVDELLP---DALSRQRLFDRILHDIPVGTDMR 137
              + P  +G DI CGM  +  G      DE  P    AL    L DR   D+PV  D  
Sbjct: 92  ENFVIPAAIGTDINCGMRLLTMGVHHTDADEHKPALIQALKNTLLLDR--RDVPVTPDSF 149

Query: 138 GPGEFDA-PRFLSASGDKGL------------------TASVVAKAAR------------ 166
                D  P +L+A   +GL                  T +V A +              
Sbjct: 150 SALFDDGLPAWLAALPLQGLWQDVDFQRLAAELGSIAGTDTVRADSRHAPEPFFAPREIL 209

Query: 167 ---QMATLGGGNHFIEVGVNS--------------RSEVGITLHSGSRRPGWDIAAWYMR 209
               + T+G GNHF+E+ +                  EV + +H+GSR  G+ +    + 
Sbjct: 210 RPSSLGTVGSGNHFVELQIVDAVLDRHAAYQAGVQEGEVVVMIHTGSRDVGFYVGQRGID 269

Query: 210 QGR-------------LFALRTPMGQAYLKDMQWAQEYALANRRAMLALVLKAFPSLDEA 256
           + R             LF L       Y++ M  A  YA  NR  +  L+  ++  +   
Sbjct: 270 KARACWPAGEKYPASVLFGLVDEQATDYMEAMGVAARYAWINRIVLTELIRSSWKQVFTR 329

Query: 257 TISHLLASTINENHNHAEVDGANVLHRKGATPAASGQPGIIPANQRDGVYITRGLGNAYY 316
             S L+   ++ +HN    +    LHRKGATPA +G+  +IP +  D  Y+  G GN  +
Sbjct: 330 DASKLV---VDLSHNIILPEHGMNLHRKGATPAKAGEFALIPGSMGDYSYLVTGKGNPDW 386

Query: 317 LSSASHGAGRVMSRQKARAHIE-QMTFERQMHGILCRTDKGVLDEAPDAYKPIAPVLAAQ 375
           L S SHGAGR   RQ  R  ++     +      +   D+ + +EAP AYKP+ PV+  Q
Sbjct: 387 LWSCSHGAGRAERRQSMRNKVDAAKQADTLPWQCITLKDERLREEAPAAYKPVTPVIDIQ 446

Query: 376 D-GLLVDVVDHFRPVVVIK 393
           +   L+  V   RP +  K
Sbjct: 447 EQSGLIQPVARLRPWLTFK 465