Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 408 a.a., RNA-splicing ligase from Escherichia coli BL21

 Score =  173 bits (439), Expect = 7e-48
 Identities = 136/389 (34%), Positives = 188/389 (48%), Gaps = 39/389 (10%)

Query: 43  IDDKAWEQIENVLSLDCLVR-LAIMPDVHAGYDLCIGGVALLAGTISPGFVGYDIGCGMC 101
           ++  A +Q+ N   +  + + +A+MPDVH G    IG V    G I P  VG DIGCGM 
Sbjct: 22  VEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMN 81

Query: 102 HVNTGRTVDELLPDALS--RQRLFDRILHDIPVGTDMRGPGEFDAPRFLS-------ASG 152
            + T  T  +L P+ L+  RQ +   + H    G   R  G ++ P            +G
Sbjct: 82  ALRTALTAADL-PENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAG 140

Query: 153 DKGLTAS----VVAKAARQMATLGGGNHFIEVGVNSRSEVGITLHSGSRRPGWDIAAWYM 208
            + LT      +     + + TLG GNHFIE+ ++   +V I LHSGSR  G  I  +++
Sbjct: 141 YQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESEQVWIMLHSGSRGIGNAIGTYFI 200

Query: 209 ----------------RQGRLFALRTPMGQAYLKDMQWAQEYALANRRAMLALVLKAFPS 252
                           R    F   T     YLK + WAQ +A  NR AM+  V+ A  S
Sbjct: 201 ALAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQS 260

Query: 253 LDEATISH---LLASTINENHNHAEVD---GANV-LHRKGATPAASGQPGIIPANQRDGV 305
           + + T+     L    IN +HN+ + +   G  + + RKGA  A +GQ GIIP +     
Sbjct: 261 ITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKS 320

Query: 306 YITRGLGNAYYLSSASHGAGRVMSRQKARAHIEQMTFERQMHGILCRTDKGVLDEAPDAY 365
           +I RGLGN     S SHGAGRVMSR KA+         R    + CR D  V+DE P AY
Sbjct: 321 FIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAY 380

Query: 366 KPIAPVLAAQDGLLVDVVDHFRPVVVIKG 394
           K I  V+AAQ   LV+V+   R VV +KG
Sbjct: 381 KDIDAVMAAQSD-LVEVIYTLRQVVCVKG 408