Pairwise Alignments

Query, 275 a.a., tetrapyrrole methylase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 290 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  154 bits (388), Expect = 3e-42
 Identities = 103/259 (39%), Positives = 141/259 (54%), Gaps = 7/259 (2%)

Query: 6   PKLWVVATPLGNPGDLSPRAREVLAAVDVVLAEDTRRTGLLFQKCGVTARRFISFHDHNE 65
           P L++VATP+GN  D++ RA +VLAA D+VLAEDTR T  L    G+ AR  +   D + 
Sbjct: 19  PGLYLVATPIGNLRDMTLRALDVLAAADLVLAEDTRVTAKLLSAYGLKAR--LERCDDHA 76

Query: 66  DGRIPE-LLTMLQSGTTAALVSDAGMPLFADPGYRLVRACRDAGVHISVVPGPSAPLTAL 124
            GR  E  +  L+ G   ALVSDAG PL +DPG+ + RA    G+ +  +PG S+ L AL
Sbjct: 77  SGRAAEQAIERLREGQVVALVSDAGTPLVSDPGFVVARAVIAEGLPVHPIPGASSLLAAL 136

Query: 125 AASGIAPLPFTFLGFPPRKASEQEKFFAPFTTVATTLVFFERKDRLAETLAVAHGVLGHR 184
             +G+      F GF P K + +        +   TLVFFE   RL ++L     VLG R
Sbjct: 137 CIAGLPADRVLFAGFLPPKTAGRTAALEALKSQRQTLVFFESGPRLKDSLTDMTAVLGPR 196

Query: 185 ELCVARELTKTHEEFIYGRLECHTAIP--DDLLGEITVVIGPPEEASVSPREQVLAIIE- 241
              VARELTK +EE + G L+     P  D   GEI VV+GP EE   +  +   A+I+ 
Sbjct: 197 PAAVARELTKLYEECVRGTLDDLAVDPRLDSPKGEIVVVVGPGEEVQATEADADAALIDA 256

Query: 242 -EERADGGRTKDVAKRVQL 259
            +  + G    +VAK + L
Sbjct: 257 LQTLSTGDAASEVAKALGL 275