Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 373 a.a., tRNA 2-thiouridine(34) synthase MnmA from Magnetospirillum magneticum AMB-1

 Score =  197 bits (501), Expect = 4e-55
 Identities = 138/357 (38%), Positives = 175/357 (49%), Gaps = 22/357 (6%)

Query: 3   IAVAMSGGTDSLFALVLLKEQGQQVCGLHARF--IPPTGHDP-------------VPDIR 47
           + VAMSGG DS     LLKEQG  V G+  +   +  +G +P             + D R
Sbjct: 15  VVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACRPNTCCAGKDIHDAR 74

Query: 48  AMCDRLGVDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVG 107
           A+ D LG+  +V+D  E F   VV  F + Y+  RTP PC  CN T+KF  L   A  +G
Sbjct: 75  AVADALGIPHYVLDFEETFRRDVVERFAQTYLEARTPVPCIECNRTVKFRDLLGVAKDLG 134

Query: 108 AVHLATGHYARLLRHPRW-GTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWR-KEA 165
              LATGHY R  R P   G  L  G DP +DQSYFL      +L+   FPLG+   KE 
Sbjct: 135 GDALATGHYVR--RRPGVDGPELWTGRDPGRDQSYFLFATTRDQLDFLRFPLGDMAGKEE 192

Query: 166 VRGELARRSIVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPIVTTRGRKIGSHAGL 225
            R   AR  +      +SQ+ICFVPD DY A +         PG IV T G+ +G H GL
Sbjct: 193 TRAIAARHHLPVAAKRDSQDICFVPDGDYAALVTRLHPDAARPGEIVDTAGKVLGRHGGL 252

Query: 226 WQYTEGQRKGLGIAWHEPLYVVGKDMENNMLLVGGREALASPGCVAEEVNLLVPYEDWPA 285
             YT GQR+GLG+    PLYVV  + E   ++VG RE L       E VN L   ++   
Sbjct: 253 IHYTIGQRRGLGLGGGPPLYVVALEPETGRVVVGSREDLNCLTIQVEAVNWL-GGDETEL 311

Query: 286 EVAVRIRYRQQPLSARVTLRDG-RLYARFREPQPPAARGQVLAVYDMEHHVLGGGVI 341
            VAV++R  +    A +    G R       P+   A GQ    Y  E  VLGGG I
Sbjct: 312 RVAVKVRSTRPAAPALLRRLSGDRAQVILDHPEQGVAPGQACVFYQGE-RVLGGGWI 367