Pairwise Alignments

Query, 346 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 403 a.a., tRNA 2-thiouridine(34) synthase MnmA from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  202 bits (514), Expect = 1e-56
 Identities = 129/357 (36%), Positives = 179/357 (50%), Gaps = 19/357 (5%)

Query: 3   IAVAMSGGTDSLFALVLLKEQGQQVCGL------HARFIPPTGH----DPVPDIRAMCDR 52
           +  AMSGG DS     LL + G  V G+      H   +   G       + D R   D 
Sbjct: 40  VVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGAALKKKGACCAGQDIHDARLAADM 99

Query: 53  LGVDLHVVDLTEAFEEHVVRPFMEDYMVGRTPNPCARCNATMKFGLLADAAAHVGAVHLA 112
           +G+  +V+D    F++ V+  F + Y+ G+TP PC RCN T+KF  L D A  +GA  +A
Sbjct: 100 IGIPHYVLDYESRFKDAVIDQFADSYLKGQTPVPCIRCNQTVKFRDLLDVARDLGAEAMA 159

Query: 113 TGHYARLLRHPRWGTVLQRGVDPAKDQSYFLSLVPHARLEKAVFPLGNWRKEAVRGELAR 172
           TGHY R        + +++ +D ++DQSYFL      +L+   FPL +  K  VRG  A 
Sbjct: 160 TGHYVRRAVAGN-RSQMRKAIDHSRDQSYFLFATTQDQLDYLRFPLADLEKPQVRGVAAE 218

Query: 173 RSIVPPLPSESQEICFVPDDDYRAFLKDRRVRLPGPGPIVTTRGRKIGSHAGLWQYTEGQ 232
             +      +SQ+ICFVP  DYR  +   R +    G IV   GR +G HAG+  YT GQ
Sbjct: 219 LGLKIAAKPDSQDICFVPSGDYRTLIDRLRPQGREAGEIVHMDGRVLGQHAGITDYTIGQ 278

Query: 233 RKGLGIAWHEPLYVVGKDMENNMLLVGGREALASPGCVAEEVNLL------VPYEDWPAE 286
           R+GL +A  EPL+V   + E   ++VG REAL +     EE N L      V   +    
Sbjct: 279 RRGLNVAVGEPLFVTRLEPETRRVIVGPREALLTASLTLEETNWLGDEATIVEAAETNIP 338

Query: 287 VAVRIRYRQQPLSARVTLRDGRLYARFREPQPPAARGQVLAVYDM--EHHVLGGGVI 341
           V  R+R  +QP  AR+ L DG +   F + +   A GQ  A+YD      VLGGG I
Sbjct: 339 VLARVRSTRQPSPARLALIDGDIRVVFDDGEEGVAPGQACALYDPTDPERVLGGGFI 395