Pairwise Alignments

Query, 421 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 795 a.a., PAS domain S-box protein from Paraburkholderia sabiae LMG 24235

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 35/252 (13%)

Query: 154 LLRGLSHDFGNALASIMGFAEIARTRPVDDPLLARSLDNVLKGCAQALSLMDRARAMAGR 213
           L  G++HDF N L  + G  E+   R   D      L   ++      +L  +  A   R
Sbjct: 281 LTGGVAHDFNNVLQVLRGNLELLEGRHGRDAWTQERLYKAIEAVEHGATLASQLLAFGRR 340

Query: 214 QSPSFQVCDLEALVETWCGELMSGNDAVGQAL--VWHARTNGGCGLSSGTVQEGSDATVA 271
           Q+       L+ +V      L S +D + +AL  V +  T    GL +  V         
Sbjct: 341 QA-------LQPVVVNLAVMLRSMDDLLRRALGEVINVETVIAGGLWNTLV--------- 384

Query: 272 PSMRPTPMVVRCDPSLLQRAFVAIVDNARDAAETG-----ETAGGVHVRLFTDGATARRH 326
                       DP+ L+   + +  NARDA   G     E +  +    +T  A   R 
Sbjct: 385 ------------DPNHLENVVLNLAINARDAMPEGGKLTLELSNAMLDEHYTALADDVRD 432

Query: 327 AGWCGIAVSDGGAGLSPEDFFRFGDPYRHAGGAREGRGNGVALARGIMRALGGALEVATF 386
             +  +AV+D G G+S E   R  +P+       +G G G+++A G ++  GG + + + 
Sbjct: 433 GQYVLLAVTDTGTGMSREIMERAFEPFFTTKPEGQGTGLGLSMAYGFIKQSGGHVRIYSE 492

Query: 387 PGRGTVVYLLLP 398
           PG GT V + LP
Sbjct: 493 PGHGTTVKVYLP 504