Pairwise Alignments

Query, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 624 a.a., UvrABC system protein C from Magnetospirillum magneticum AMB-1

 Score =  313 bits (801), Expect = 2e-89
 Identities = 223/671 (33%), Positives = 315/671 (46%), Gaps = 87/671 (12%)

Query: 20  LSTIPLTPGVYLYKDESGRIIYVGKARCLRRRVASYFRDVSALTPKTVAMLRHAVTIDTL 79
           ++T+PL+PGVY      G ++YVGKA+ L++RV +Y R    +  +   M+    +++ +
Sbjct: 22  VATLPLSPGVYRMLSGKGDVLYVGKAKSLKKRVVAYTRP-DRMPLRIQRMIAETASMEVV 80

Query: 80  STTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRDDGRY 139
           +T TE EALLLE++LIK   PRYNI+L+DDK +    I A H +P++   R AR   G Y
Sbjct: 81  TTRTEVEALLLESNLIKSLGPRYNILLKDDKTFPHILITADHDWPQVLKHRGARNRKGEY 140

Query: 140 FGPFTSASAARETWKTIHRAFPLRRCSDRAFGNRVRACLYHHMGQCLGPCVNEVPSETYA 199
           FGPF SA A  +T   + RAF LR CSD  F +R R CL   + +C  PCV  +  + Y 
Sbjct: 141 FGPFASAGAVNQTLAALQRAFLLRSCSDSVFASRTRPCLLFQIKRCSAPCVERIDRDEYL 200

Query: 200 ALLEQVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERTVERQAAVLPG 259
           AL+E+    LSG+S  +   L   ME+A++ +++E AAV RDRIRAL R    Q      
Sbjct: 201 ALVEEARAFLSGQSRRVQHDLTARMESAAEAMEYEAAAVFRDRIRALTRIQAHQDINPAE 260

Query: 260 GGDLDVVGVVEVENGLALGVLFVRQGVLLDGRSFFWPGLGFAEAPELLWSFLGQFYGPQA 319
             + DVV + +  +G+ + V F R G     R++F       EAP+++ +FLGQFY  + 
Sbjct: 261 VEEADVVALHQAGDGVCIQVFFFRSGCNYGNRAYFPVHAQGEEAPQIMAAFLGQFYADK- 319

Query: 320 TIPPRIVVPWLPDEDGETGDALDGSSDAVVPVAAATTIDASLADVRTGTEVTSLINASHA 379
           T P  I++   PDE      AL   +   V ++     D                   HA
Sbjct: 320 TPPREILLSLEPDEVAIVAQALSEKAGRKVTLSVPKRGDRKRL-------------VEHA 366

Query: 380 APNVGESTQGDTLAGATGKGATHLMLETALAALRGGIVRIALPRNPAENRLVDMAMSNAR 439
             N                                   R AL R  AE+           
Sbjct: 367 HDN----------------------------------ARDALGRRMAES----------- 381

Query: 440 EEARRKADTPLQDLLARALHLAGPPHRIEAVDVSHTGGRNTRVGMVVFEDGKPFPEAYRT 499
             A+RK    L + +A    +   P RIE  D SH  G +    M+V         AYR 
Sbjct: 382 -GAQRK----LLEGVAELFGMESAPERIEVYDNSHIQGSDAVGAMIVAGPDGLMKSAYRK 436

Query: 500 YAFEDGD---GDDYGTLAAWAGRRVESGPP---------WPDLLLVDGGRGQLAAVVRAF 547
           +     D   GDD+G +     RR               WPDL L+DGGRGQL A +   
Sbjct: 437 FNIRSTDLTPGDDFGMMREVLTRRFARAQKEDPDRDRGLWPDLALIDGGRGQLNAALGVL 496

Query: 548 EECGMGAAFAVASIAKARTEEGRADRRAGNVSDRIFLPGRANPLPLRAGAPELLFLQHVR 607
            E G+     V  IAK        DR AG   +R FL G+  P+ L +  P L FLQ +R
Sbjct: 497 AELGIDDVMLV-GIAKG------PDRNAGR--ERFFLAGK-EPISLESRHPVLYFLQRLR 546

Query: 608 DTVHDYSIGKHRRARAGAALTGELQRVEGIGPATARALWERFDSLQAMADAGVEGLAAVP 667
           D  H ++IG HR  R+   +   L  + GIGP   +AL   F S +A+A+AG+  L +V 
Sbjct: 547 DEAHRFAIGTHRARRSKGLVQSTLDALPGIGPKRKKALLHHFGSARAVAEAGLPDLESVE 606

Query: 668 GVGRARAAALH 678
           G+  A A  +H
Sbjct: 607 GISHAMAKKIH 617