Pairwise Alignments

Query, 702 a.a., excinuclease ABC, C subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 626 a.a., excinuclease ABC subunit UvrC from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  264 bits (675), Expect = 9e-75
 Identities = 207/673 (30%), Positives = 297/673 (44%), Gaps = 92/673 (13%)

Query: 24  PLTPGVYLYKDESGRIIYVGKARCLRRRVASYFRDVSALTPKTVAMLRHAVTIDTLSTTT 83
           P  PGVY    E G  +YVGKA+ L++R+  Y +     T +   M+    +++ + T T
Sbjct: 24  PDKPGVYRMYGEDGSCLYVGKAKSLKKRIIQYAQG-RFHTQRIGLMVSQTRSMELVVTAT 82

Query: 84  EKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRDDGRYFGPF 143
           E EALLLE++ IKK +PR+N+VLRDDK +    I   H  P++   R A    G YFGPF
Sbjct: 83  ETEALLLESNFIKKLKPRFNVVLRDDKSFAELMIRRDHRAPQVRKHRGAHTTPGDYFGPF 142

Query: 144 TSASAARETWKTIHRAFPLRRCSDRAFGNRVRACLYHHMGQCLGPCVNEVPSETYAALLE 203
            S  A   T  T+ +AF LR CSD  +  R R C+ H + +C  PC   +  E Y  L+ 
Sbjct: 143 ASTWAVNRTLNTLQKAFLLRSCSDSVYETRTRPCMLHQIKRCSAPCTGLISLEDYGELVT 202

Query: 204 QVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERTVERQAAVLPGGGDL 263
           +    L G+S  ++  L  EM+AAS  +DFE+AA +RDRIRAL       +       + 
Sbjct: 203 EAEQFLRGKSRAVIGRLSKEMQAASDEMDFEQAARVRDRIRALSAIAMENSVSADSVAEG 262

Query: 264 DVVGVVEVENGLALGVLFVRQGVLLDGRSFFWPGLGFAEA-PELLWSFLGQFYGPQATIP 322
           DV  +        + V F R G    GR++F P +   +  PE+L +FLGQFY     IP
Sbjct: 263 DVFALHSDGGQACVQVFFYRAGQNWGGRAYF-PRVDKTDTDPEILAAFLGQFY-EDKPIP 320

Query: 323 PRIVVPWLPDEDGETGDALDGSSDAVVPVAAATTIDASLADVRTGTEVTSLINASHAAPN 382
             I+    P E     +A    +D  V +                               
Sbjct: 321 RLILSNVRPHELELLEEAFSMKADRKVEIV------------------------------ 350

Query: 383 VGESTQGDTLAGATGKGATHLMLETALAALRGGIVRIALPRNPAENRLVDMAMSNAREEA 442
                +G+ LA          +++ AL   R  + R  L  + A+ +++D          
Sbjct: 351 --RPMRGEKLA----------LVDHALTNAREALGR-RLAESSAQGKILDE--------- 388

Query: 443 RRKADTPLQDLLARALHLAGPPHRIEAVDVSHTGGRNTRVGMVVFEDGKPFPEAYRTYAF 502
                      +  A  L   P RIE  D +H  G N   GMVV          YR +  
Sbjct: 389 -----------VCEAFGLESRPERIEIYDNAHIQGTNAVGGMVVAGPEGFQKSQYRKFNI 437

Query: 503 EDGD---GDDYGTLAAWAGRRV-------ESGPP------WPDLLLVDGGRGQLAAVVRA 546
              D   GDDYG +     RR        E G         PDLLL+DGG GQLA V+  
Sbjct: 438 RGEDLTPGDDYGMMREVMRRRFSRLIKDEEEGEAKGEDVVRPDLLLIDGGAGQLAEVLAV 497

Query: 547 FEECGMGAAFAVASIAKARTEEGRADRRAGNVSDRIFLPGRANPLPLRAGAPELLFLQHV 606
             + G      V  +AK        DR AG   ++ F+PG+A P  L   +P L +LQ +
Sbjct: 498 MADLGGLDDITVVGVAKG------PDRDAG--LEKFFMPGKA-PFMLPLKSPALYYLQRL 548

Query: 607 RDTVHDYSIGKHRRARAGAALTGELQRVEGIGPATARALWERFDSLQAMADAGVEGLAAV 666
           RD  H ++ G H + R+       L  +EG+GP   +AL   F S + ++ A +  L  V
Sbjct: 549 RDEAHRFANGAHAKRRSMDIKKNPLDEIEGVGPGRKKALLHAFGSAKGVSRASLADLVKV 608

Query: 667 PGVGRARAAALHA 679
            G+ +  A  +HA
Sbjct: 609 DGINQPLAERIHA 621