Pairwise Alignments

Query, 237 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 238 a.a., SEED: TPR domain protein from Desulfovibrio vulgaris Hildenborough JW710

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 26/231 (11%)

Query: 5   TGVFVSVR--HERTGTGTTARESVQRITWFGTLRDDGVA-LVMPLSDRMLPTGIIREVPE 61
           TG F+ V     R G G   R       WF  + DDG   LV PL     P G +R V  
Sbjct: 3   TGAFIGVHATRPRGGDGRLKRY------WF--VWDDGDRYLVQPLDGAYQPAGDVRPVSA 54

Query: 62  ERFLEEFMPDQATYEEHFRE-TAESLRGRLQLASTLPTDLYPEERILLDALSALLHGRSA 120
             F ++F P         R+   +  R  +Q       +L  E R      +    G + 
Sbjct: 55  ATFRDDFEPQPGILAVPLRDFEPQPARDGVQGGDAGEDELEHELR------AGFALGMTR 108

Query: 121 AKPVDADIPAVLELLAH---GQEGRSAGAFQTRL-SGAAVDYRRQGDYPRALLFYDRALT 176
            +  + D    L L  H    +EG   G     L +   +  R++     A  F+ R L 
Sbjct: 109 LR--NGDREGALRLFEHVLATEEG--VGPVHKHLFTEFGIHLRKRRLLKTACDFHRRVLA 164

Query: 177 MQGQEDRLLFNVARVHYEMGELAEAETCLKRALESNPALEEAGRFLAFLQK 227
           +  ++    FN AR  YE G++  A   L  +L  +P LE A  FLA++++
Sbjct: 165 LSPEDSHAHFNAARALYEDGDIDAAVRHLNHSLNISPDLEPASLFLAYIER 215