Pairwise Alignments

Query, 275 a.a., amino acid ABC transporter, amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  110 bits (274), Expect = 5e-29
 Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 8   ALAAAFLVFTGSAALAGPAYDNVMKDKKIRVGLMTDSIPGGFYNEKGEWGGFDYDIATEI 67
           A+AAA +     A         + +   I +G    SIP  +   K E  G+ +DI   +
Sbjct: 12  AIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSHDIQLAV 71

Query: 68  A----KRMGVDIERVQVN---NKTRIAYVQQGRVDISVSNMTHTRERDKSVDFSITYFFD 120
                K++G DI +V+ N   ++TRI  VQ G VD+   + T+  ER + V FS+  F  
Sbjct: 72  VDALKKQLGTDI-KVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGIFEV 130

Query: 121 GQKVL--AKKGQ--FKSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQKE 176
           G ++L   K GQ  +K   D+ GK + T  GTTSE  + +A+    D     +VIS +  
Sbjct: 131 GTRLLTKVKDGQPAYKDFPDLAGKNVVTTAGTTSE-RILKAMN--ADKQMKMNVISAKDH 187

Query: 177 SECFQALQMGRVAGWSTDASILVGYSAK--EPGKFELVGNFLAEEPYGIAMPQDDSALRD 234
            E F  L+ GR   +  D ++L G  AK  +P  + + G   + E YG  + +DD+A + 
Sbjct: 188 GEAFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKK 247

Query: 235 AVNAALQDMWKDGTYKTIYNKWY 257
           AV+ A+   +K G     Y KW+
Sbjct: 248 AVDDAIVAYFKSGEVNKSYEKWF 270