Pairwise Alignments

Query, 275 a.a., amino acid ABC transporter, amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 278 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola 67-19

 Score =  127 bits (319), Expect = 3e-34
 Identities = 83/264 (31%), Positives = 130/264 (49%), Gaps = 16/264 (6%)

Query: 12  AFLVFTGSAALAGPAY----DNVMKDKKIRVGLMTDSIPGGFYNEKGE-WGGFDYDIATE 66
           AF +  G  +LAG A     D++ K   ++V +   + P G+ + + +   G+D D+A  
Sbjct: 7   AFSLLAGLVSLAGNAQADKLDDIQKAGVVKVAVFDSNPPFGYVDPQSKKLVGYDVDVAQA 66

Query: 67  IAKRMGVDIERVQVNNKTRIAYVQQGRVDISVSNMTHTRERDKSVDFSITYFFDGQKVLA 126
           I K +GV +E    N   RI  +   +VD+  +N T T ER K V+FS+ YF  GQK +A
Sbjct: 67  IGKALGVKVELRATNPANRIPLLTSKKVDLIAANFTITDERAKQVNFSVPYFATGQKFIA 126

Query: 127 KKGQFKSVKDMVGKKIATMQGTTSEVNVKRALKEAGDPNPDQSVISFQKESECFQALQMG 186
           ++G  K+  D+   +I   +GT  E+ ++       +  P   VIS+      F AL+ G
Sbjct: 127 RQGVLKTPDDIKNLRIGADKGTVQEITLR-------EHYPTAKVISYDDTPLAFTALRNG 179

Query: 187 RVAGWSTDASILVG----YSAKEPGKFELVGNFLAEEPYGIAMPQDDSALRDAVNAALQD 242
            V   + D + LVG      A +   FE+    + +E  GI +P+ +  L   VN  L +
Sbjct: 180 NVQAITQDDAKLVGLLGNLPAAQKADFEISPFSITKEYQGIGIPKGEDRLTQKVNDILLN 239

Query: 243 MWKDGTYKTIYNKWYGPGTPFEMP 266
           + K G    IYN W+GP TP   P
Sbjct: 240 LEKQGDAVKIYNHWFGPTTPSAQP 263