Pairwise Alignments

Query, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 245 a.a., DNA-binding response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 62.0 bits (149), Expect = 1e-14
 Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 69/305 (22%)

Query: 3   RLSTLLVHPDPMLRHRLRAMLEPVDFLRVLGEAAGAEEALALLNALPYGAVFLGISLAEG 62
           +L  ++V  +P+    L   ++ +D L ++     A EA   L       +FL I + + 
Sbjct: 2   KLRCMIVDDEPLALDVLETFIQRLDNLELVCRCNNAVEAYGCLQQEHIDLLFLDIQMPK- 60

Query: 63  PDGMEVARRLMGNRDHPALIFIADDESRAFEAFELDATDYLIFPCAADRFDRTLMRLRQF 122
             G++  R L      P +I        A E FEL+A DYL+ P A +RF + + ++   
Sbjct: 61  LTGIDFLRSLA---HPPHVILTTAYRDYAVEGFELNAVDYLLKPIAFERFLKAVSKV--- 114

Query: 123 RTHFRLAPAPGSRWREQPQAAPEELPPPAMDDLPPPGTEEGPPFETLQLPLAEDEQDTLI 182
                              AAPE+         PP                A+D ++  I
Sbjct: 115 -------------------AAPEQHKTVVAAAAPPT--------------FAQDYKEAFI 141

Query: 183 SALGEAVDYSQRVRPVELDKLAVSVDGKTLLIPYGEIAFVEAYEDYSYVHTADDKYLTSY 242
                                 +  D K + +   +I ++E+ +DY  V T   + ++  
Sbjct: 142 Y---------------------LKADKKMVKVMLSDILYIESLKDYIRVKTETKEIISYQ 180

Query: 243 RLKNLEGRLRPHRFFRVHRKYLVNLDMVTELAAVSGGNCLLRTAGRTRIELPISRRRLGE 302
           ++  LE +L   +F R+HR ++V LD +   +A +            + E+PI R    E
Sbjct: 181 KISFLEEKLPTDKFLRIHRSFIVALDKIQAFSATA--------VDIGKAEVPIGRFYKNE 232

Query: 303 LKQIL 307
           + Q+L
Sbjct: 233 VLQVL 237