Pairwise Alignments

Query, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 266 a.a., Transcriptional regulator protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 79/305 (25%), Positives = 119/305 (39%), Gaps = 49/305 (16%)

Query: 5   STLLVHPDPMLRHRLRAMLEPV-DFLRVLGEAAGAEEALALLNALPYGAVFLGISLAEGP 63
           + L+   +P+L   L+A L      L+VL      + A+A    L    +FL I +  G 
Sbjct: 4   TALIAEDEPLLAQALQAELARAWPGLQVLATVGDGDAAVAQALRLQPDVLFLDIRMP-GQ 62

Query: 64  DGMEVARRLMGNRDH----PALIFIADDESRAFEAFELDATDYLIFPCAADRFDRTLMRL 119
            G++ A  L          PAL+F+   ++ A +AFE  A DY++ P   DR  RT+ R+
Sbjct: 63  TGLQAAAELADEWPDGVPFPALVFVTAYDAYAVQAFEAQAVDYVLKPVQPDRLARTVQRV 122

Query: 120 RQFRTHFRLAPAPGSRWREQPQAAPEELPPPAMDDLPPPGTEEGPPFETLQLPLAEDEQD 179
           +Q     R  P  G        AA +E     +                           
Sbjct: 123 QQVLAQRR--PVGGG------DAALDEASLARL--------------------------- 147

Query: 180 TLISALGEAVDYSQRVRPVELDKLAVSVDGKTLLIPYGEIAFVEAYEDYSYVHTADDKYL 239
                   A+  S +  P  L  +   V     ++P GE+   EA + Y  V TA  + L
Sbjct: 148 -------RALLTSSQAAPARLQVIQAGVGQGIRMVPIGEVLVFEAADKYVRVLTAGGEVL 200

Query: 240 TSYRLKNLEGRLRPHRFFRVHRKYLVNLDMVTELAAVSGGNCLLRTAGRTRIELPISRRR 299
               LK L  +L P  F++VHR  +V  D +  +     G   LR  GR     P+SR  
Sbjct: 201 IRTPLKELLPQLDPAVFWQVHRGTVVRADAIDSVQRDEAGKHSLRLRGRPE-NWPVSRLY 259

Query: 300 LGELK 304
            G+ K
Sbjct: 260 AGQFK 264