Pairwise Alignments

Query, 309 a.a., DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 257 a.a., DNA-binding response regulator LytR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.9 bits (211), Expect = 9e-22
 Identities = 81/278 (29%), Positives = 117/278 (42%), Gaps = 54/278 (19%)

Query: 34  EAAGAEEALALLNALPYGAVFLGISLAEGPDGMEVARRLMGNRDHPALIFIADDESRAFE 93
           EAA A EAL+L+ +     VF  I +  G  G +V +      + P  +F+   +  A  
Sbjct: 32  EAASAGEALSLIASHHPDLVFQDIEMP-GRGGFDVLQAASLMTNPPVFVFVTAFDQHAIR 90

Query: 94  AFELDATDYLIFPCAADRFDRTLMRLRQFRTHFRLAPAPGSRWREQPQAAPEELPPPAMD 153
           AF+ +A DYL+ P A +R  R L R+RQ     RLAP  GS                   
Sbjct: 91  AFDENAADYLLKPVAPERLARCLERVRQ-----RLAPDGGSTQ----------------- 128

Query: 154 DLPPPGTEEGPPFETLQLPLAEDEQDTLISALGEAVDYSQRVRPVELDKLAVSVDGKTLL 213
                                ED  D L++ +G       R RP  L ++AV   G+  L
Sbjct: 129 --------------------VEDMMDRLLARIG-------RERP--LPRIAVEQGGRIHL 159

Query: 214 IPYGEIAFVEAYEDYSYVHTADDKYLT--SYRLKNLEGRLRPHRFFRVHRKYLVNLDMVT 271
           +P  E+  +EA E    V T   ++    +  L  +E RL    FFR +R  LVNL+ V 
Sbjct: 160 VPTPEVVLIEAEEKRIAVVTEAGRFTCHGAQSLARIEDRLAGQPFFRANRAVLVNLERVA 219

Query: 272 ELAAVSGGNCLLRTAGRTRIELPISRRRLGELKQILGL 309
           E +    G   L      R  + +SR R+ + KQ LG+
Sbjct: 220 EFSPWYNGKYHLVMNDSERTGVTVSRNRVRDFKQALGV 257