Pairwise Alignments

Query, 665 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  126 bits (317), Expect = 3e-33
 Identities = 123/408 (30%), Positives = 184/408 (45%), Gaps = 49/408 (12%)

Query: 277 AARLHAALAEASSRQFDRQSALLDRVFDEVPAGICLMDITGRVLHLNRAMADVVGASETE 336
           A R H     A+ +    + +    + D +  G+   D+ GR+ ++N A   +VG +  E
Sbjct: 270 ALRRHVRRRLAAEQALRTEHSFRKAMEDSLTVGMRARDLEGRITYVNPAFCHMVGWTADE 329

Query: 337 LVGTDCFAMLH--PADRAAARALFMHDLENAGSPEGFHELKEYRFLRKDGTARECQVASA 394
           LVGT    ML+  P D      L    +      EGF    E  F RK+G      +  A
Sbjct: 330 LVGT-VPPMLYWVPEDLEHTYELHRAVMRGEAPAEGF----ELVFRRKNGERFSALIYEA 384

Query: 395 MLRDGDGPILG-MAVVTDVTEMRRIKAEAARMGQ--------LATIGELAAGVAHEINSP 445
            L D DG   G MA V D+TE +R + E +R  Q        L T+GE+A+ +AHE+N P
Sbjct: 385 PLIDSDGRHTGWMASVLDITERKRAE-ELSRQHQEKLQHTARLITMGEMASTLAHELNQP 443

Query: 446 ANAIINCAD-----LLMEDAFDSAMVRDMARRIRSEGQRVAAITHNLLAFARERKPPPPP 500
            +AI + A      L   DA    +V  + + + ++ QR   I   +  F R+ +P   P
Sbjct: 444 LSAIASYATGCLNRLSAGDARPEELVPPLTK-LGAQAQRAGQIIRRIHDFVRKSEPLVVP 502

Query: 501 ALVDVKVVLRDTLELTAAQMRAEGIL--LEVSCSSGAL-------HVLGRTRELQQVFLN 551
            L+D   ++   +       R  GI   L++S + GA        H+L     ++QV LN
Sbjct: 503 CLLDE--IIEGVVGFLEPDARKRGIRIDLDLSLTPGAARPRVEADHIL-----IEQVILN 555

Query: 552 IVSNARHALNAIPGSAARCLSINAEPRAAGSCVSGPVVSVSFRDTGGGIDPSIRDRVMEP 611
           +V NA  A+   P    R L+I+ +      C  G    +   D G GI P I   +  P
Sbjct: 556 LVRNAMEAMGHTPRPQRR-LTISLQ------CADGQA-RIRVADRGTGIPPEIAANLFSP 607

Query: 612 FFTTKGEGRGTGLGLSISNAIIEDHGGVLCIESDGETGTCVTVELPQM 659
           FFTTK    G G+GL+I  +I+E H G L  E +   G+     LP+M
Sbjct: 608 FFTTK--ETGMGMGLNICRSIVEAHRGHLWFEENPGGGSVFLFTLPEM 653