Pairwise Alignments

Query, 665 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 964 a.a., PAS domain S-box protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  127 bits (320), Expect = 2e-33
 Identities = 128/451 (28%), Positives = 190/451 (42%), Gaps = 54/451 (11%)

Query: 257 VAVYSLDVTLPRR-AEADLR----AAARLHAALAEASSRQFDRQSALLDRVFDEV-PAGI 310
           VA+  ++   PR   ++DLR     A R+  A   A S    R S    RVF +  P  I
Sbjct: 391 VAMVFVNHATPRHYTDSDLRLMRDVAERVRTATERARSEAALRDSEAQFRVFAQATPIQI 450

Query: 311 CLMDITGRVLHLNRAMADVVGASETELVGTDCFA-MLHPADRAAARALFMHDLENAGSPE 369
                 G +   N  +    G +E  L GT  +  ++HP D   A   ++  L +    E
Sbjct: 451 WASWADGSLYWFNPQVYAYSGLAEGALDGTTGWGKVVHPDDLDWASERWVQALASGQVYE 510

Query: 370 GFHELKEYRFLRKDGTARECQVASAMLRDGDGPILG-MAVVTDVTEMRRIKAEAARMGQ- 427
                 E+R  R DG  R   V +  + D +G IL  +   TD+ ++RR  AE AR  + 
Sbjct: 511 N-----EFRIRRHDGVYRTFMVRAEPVHDEEGRILRWVGSNTDIEDLRRQSAELARFNET 565

Query: 428 ------------------------LATIGELAAGVAHEINSPANAIINCADLLMEDAFDS 463
                                   +  +G+L  G+AH+ N+    I    +L+       
Sbjct: 566 LEEQVAERTSALMQAEEALRQSQKMEAVGQLTGGIAHDFNNLLAGISGSLELITNRIAQG 625

Query: 464 --AMVRDMARRIRSEGQRVAAITHNLLAFARERKPPPPPALVDVKVVLRDTLELTAAQMR 521
             A V       +   +R AA+TH LLAF+R +   P P   D   ++R   +L   +  
Sbjct: 626 RHAEVERFTVAAQGAAKRAAALTHRLLAFSRRQTLDPKPT--DPNRLIRGMEDLVR-RTT 682

Query: 522 AEGILLEVSCSSGALHVLGRTRELQQVFLNIVSNARHALNAIPGSAARCLS-----INAE 576
             GI +EV   +G   VL    +L+   LN+  NAR   +A+P      +      I+A 
Sbjct: 683 GPGIEVEVVAGAGLWPVLIDAHQLENAVLNLCINAR---DAMPSGGRLTIETGNRWIDAR 739

Query: 577 PRAAGSCVSGPVVSVSFRDTGGGIDPSIRDRVMEPFFTTKGEGRGTGLGLSISNAIIEDH 636
              A     G  VS+   DTG G+ P +  R  EPFFTTK  G GTGLGLS+    +   
Sbjct: 740 TAKAQDLEPGQYVSICVSDTGTGMAPEVAARAFEPFFTTKPLGEGTGLGLSMIYGFVRQS 799

Query: 637 GGVLCIESDGETGTCVTVELPQ---MVEDGD 664
           GG + I S+   G  + + LP+    V+D D
Sbjct: 800 GGQVRIYSEAGEGAMICLYLPRHFGEVDDAD 830