Pairwise Alignments

Query, 156 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 193 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 58.2 bits (139), Expect = 8e-14
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 6/142 (4%)

Query: 15  LAALVMAALTLITGANVVMRYCTNVSFAMTEEVSVFLLMVLTLVGAVSAFAEGRHVRITL 74
           L AL++AA+ ++   NVV+RY  N    ++EE++ +  +  T +GAV A  +  H+ + +
Sbjct: 15  LIALLLAAMVVLVFGNVVLRYGFNSGITVSEELARWFFIWGTFLGAVVAMRDRSHLGVDM 74

Query: 75  FVNSLPDTGRKVCNALAWMCNVAMFGMLTWLAALVAWDDYSFEVTSPALGVPQWWYSG-- 132
            V+ LP  G+++C   + +  + +  ML   +  +     ++EV++P  G    W  G  
Sbjct: 75  LVSRLPARGKRLCLVASHLVMLLIVWML--FSGSLQQSRINWEVSAPTSGYSMAWVYGVG 132

Query: 133 --WLPLAAAVIVLRLVLMLFQR 152
             +  LAA +++L L  +L  R
Sbjct: 133 CVFACLAAPMLLLDLWRILSGR 154