Pairwise Alignments

Query, 156 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 171 a.a., Predicted rhamnogalacturonide-specific TRAP-type transporter, small transmembrane component RhiB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 49.3 bits (116), Expect = 3e-11
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 1/130 (0%)

Query: 14  ALAALVMAALTLITGANVVMRYCTNVSFAMTEEVSVFLLMVLTLVGAVSAFAEGRHVRIT 73
           A+  LV+A +  I    VV RY   V   +TEE+  FLL+ ++++G      + +H+ +T
Sbjct: 14  AICCLVLAIMVGIACWQVVSRYILGVPSTLTEEMLRFLLVWVSMLGMAFVAGQKQHISLT 73

Query: 74  LFVNSLPDTGRKVCNALAWMCNVAMFGMLTWLAALVAWDDYSFEVTSPALGVPQWWYSGW 133
           L ++ +  T R   + +  +  +A F +   +   +     S    SPALG+P       
Sbjct: 74  LLLDKVSPTIRGWWDIILQVIFIA-FSIWVLIIGGLKISAISMLQISPALGIPMGKIYYA 132

Query: 134 LPLAAAVIVL 143
           LP A  +I+L
Sbjct: 133 LPCAGVLIIL 142