Pairwise Alignments

Query, 281 a.a., nitrogen fixation protein nifU (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 275 a.a., Fe-S cluster assembly protein NifU from Dickeya dadantii 3937

 Score =  247 bits (630), Expect = 2e-70
 Identities = 131/270 (48%), Positives = 182/270 (67%), Gaps = 9/270 (3%)

Query: 1   MWDYTDKVREHFLNPRNVGSLDDANAIGEVGSLACGDALKLYLKID-DEGRIQDARFQTF 59
           MW+Y++KV++HF NPRN   + +ANA+G+VGSL+CGDAL+L L++D D   I DA FQTF
Sbjct: 1   MWNYSEKVKDHFFNPRNARVVAEANAVGDVGSLSCGDALRLMLRVDPDSETILDAGFQTF 60

Query: 60  GCASAIASSSALTELIKGMLVEDALKISNKDIAAHLGGLPKEKMHCSVMGQEALEAAIRN 119
           GC SAIASSSALTELI G  + +A +++N+ IA +L GLP EKMHCSVMGQEAL  AI N
Sbjct: 61  GCGSAIASSSALTELIIGRTLREAEQVTNQQIADYLDGLPPEKMHCSVMGQEALRVAIAN 120

Query: 120 WRGEPAVEHAHEGKLVCKCFGITDEQIIRAIRENNLKTVEDITHFTKAGGGCGDCLEEIR 179
           +RGE   +   EG L+CKCF + + QI RA+  N L T++++ ++TKAGGGC  C E+I 
Sbjct: 121 YRGETLEDDHEEGALICKCFAVDEGQIRRAVVANGLTTLQEVINYTKAGGGCSACHEKIE 180

Query: 180 HILDVELGKEPECLTPLEPPKKLTNVQRMQLVMKVLDGEIRPRLQQDGGDIELVDMNGTE 239
             L  ++  E E  TP      + + +  Q+   V   E+RP +Q DGGD+ LV+++  +
Sbjct: 181 LAL-AQILSEHEA-TPAAAAIVVKDARWQQVAEAV--AELRPHIQADGGDMSLVNVSERQ 236

Query: 240 VMVALRGMCTSCPSSQLTL----KEFVERT 265
           V V+L G C  C  + +TL    ++ VERT
Sbjct: 237 VTVSLSGSCNGCMMTDMTLAWLQQKLVERT 266