Pairwise Alignments

Query, 316 a.a., chemotaxis protein CheV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 309 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

 Score =  133 bits (334), Expect = 6e-36
 Identities = 101/301 (33%), Positives = 158/301 (52%), Gaps = 15/301 (4%)

Query: 11  GTNELEIVEFYIDEPGYRGHYGVNVAKVLEIIRKQTVTALPEMPHPAVLGAFAHRGGRII 70
           G N LE++ F ++       YG+NV KV E+++   +T LP+  HP V G  A+  G  I
Sbjct: 16  GQNRLELLLFRLNGEQL---YGINVFKVREVLQCPALTLLPKA-HPVVRGV-ANIRGATI 70

Query: 71  PLVDLAAYLG-KPLSDDAAQRKIIITEFNQVVTGFLVSGVTRIHRISWIDVEAPGRFLQG 129
           P++DL+   G +PL +D     +IITE+N    GFLV  V RI  ++W ++  P +    
Sbjct: 71  PILDLSMATGLRPLQEDTRNSFVIITEYNTKTQGFLVHSVERIVNMNWEEIHPPPKGTG- 129

Query: 130 MSSSSITGVVRLEGRVVFLLDMESIVAEMHPDL-SIRMGRTRATAQEAPMRRYTVLHADD 188
                +T V R++ R+V ++D+E ++AE+ P   S+  G   A  Q+  +    VL  DD
Sbjct: 130 -RDHYLTAVTRVDNRMVEIIDVEKVLAEVSPSSESVSAGVIDAEVQDKAV-LMRVLTVDD 187

Query: 189 SGSVRKLVRNLLEASGRFEVLQADDGQGAWEMLETLRAEAEGRGQRIADVVQAVISDIEM 248
           S   RK V   L+  G  EV+  +DG+ A   L  L  E    G++  +    +ISDIEM
Sbjct: 188 SSVARKQVSRCLQTVG-VEVVALNDGRQALNYLRQLVDE----GKKPEEEFLMMISDIEM 242

Query: 249 PRLDGLTLCRRIKEDVALRVLPVALFSSLVTDKLEHKGRSVGADAQFAKPDLQQLSERLL 308
           P +DG TL   I+ D  ++ L + L +SL     +   + VGAD   AK     L++R++
Sbjct: 243 PEMDGYTLTAEIRSDPRMQKLHICLHTSLSGVFNQAMVKKVGADDFLAKFKPDDLAQRVV 302

Query: 309 E 309
           +
Sbjct: 303 D 303