Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  209 bits (532), Expect = 1e-58
 Identities = 120/428 (28%), Positives = 236/428 (55%), Gaps = 20/428 (4%)

Query: 9   VLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPL 68
           V++  +V    + + +A+++   + +GI +   N+ ++ + +    ++ I  +  A IP 
Sbjct: 4   VMVATMVLCFALSISVAVSIGLASILGIQVTNANMLISVKEM----FNSINKFPLAAIPF 59

Query: 69  FVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRV 128
           F+L G L+    + R   + A+ ++  +  GL +  V    IFAAV+G S+A+      +
Sbjct: 60  FILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAI 119

Query: 129 AVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLML 188
            +P + +HGY  +++A   A S+ LG++IPPS+ +I+YG+ AEVSIG +F+AG  PG++ 
Sbjct: 120 LIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGIL- 178

Query: 189 AGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLGG 248
                     ++LA   FV          K D +   MP    + +    +L+ +++LGG
Sbjct: 179 ----------ISLALMLFVWVYCKWKGWGKNDGE-GRMPFGRALWQAGWALLMPVIILGG 227

Query: 249 LYTGFFTPTEAGGIGAFGALIVAL-SRRSLDRHKLWQVMKQTGVISVSILLLLVAASFYS 307
           +Y G FTPTEA  +  F AL+V +   R +    L+ +++++ + S  I+ ++  A  ++
Sbjct: 228 IYGGVFTPTEASAVAVFYALVVGMVIYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFA 287

Query: 308 RMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPIAQG 367
            ++  AG+P+AI   +      P  FL      + ++GM +++++ ++++ PI AP+A  
Sbjct: 288 FLITRAGVPDAIGHWLQQVLQSPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVH 347

Query: 368 MGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVMLLV 427
            GID +HFG++ V+ + +G++TPPFG+++F          +S++ I    +PF+ V++  
Sbjct: 348 FGIDPVHFGLIMVVNLALGMITPPFGVNLFAACTVAR---ISLDRIVRHLVPFVLVIMAC 404

Query: 428 LVIVALVP 435
           L+++  VP
Sbjct: 405 LMVITYVP 412