Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 431 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  231 bits (589), Expect = 3e-65
 Identities = 136/435 (31%), Positives = 233/435 (53%), Gaps = 16/435 (3%)

Query: 1   MTTLAFGFVLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIAD 60
           M   + GF+ +     L L+ + +A+A+  V   G+ L+R          ++   +G A 
Sbjct: 1   MIEASLGFLAV---FALALLRIPLALAMAIVGLTGLGLMRGWSPAFASTSQVIFETGFA- 56

Query: 61  YLFATIPLFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIA 120
           Y+ + IPLFVLMG LV+ + + R+ +  A   +     GL +A+V A+  F  + G SIA
Sbjct: 57  YVLSVIPLFVLMGNLVARAGMARELYAGANAFVGHRKGGLAMASVIASGGFGCICGSSIA 116

Query: 121 SAAVFTRVAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLA 180
           +AA  TRVA PEM RHGY+   + G++A    LG+LIPPS +++IYGI+ E  IG +F+A
Sbjct: 117 TAATMTRVAYPEMKRHGYKDTLATGSIAAGGTLGILIPPSTIMVIYGIMTETDIGKLFIA 176

Query: 181 GILPGLMLAGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVL 240
           G+LPGL+        ++ +T   P   LA P   +        T       +  +  +VL
Sbjct: 177 GVLPGLVAIACLCAAVVYITWRDP---LAGPPGER-------FTWTERLAAVRGIWAVVL 226

Query: 241 LVILVLGGLYTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLL 300
           L  LV+GG+Y GFFT TE  G+GA GA + AL R  L    L  ++ ++   +  +  +L
Sbjct: 227 LFALVIGGIYGGFFTATEGAGVGASGAFLFALLRGVLTPRVLMDILVESTRTTAMLFTIL 286

Query: 301 VAASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPI 360
           + A  ++  +    +P  +   +      P+  +     I + +G++++  S++L+ +P+
Sbjct: 287 IGAMVFTSFINFTSMPGDLRDFLLQFSPHPILVVVVMMAIYVALGLVMEELSMVLLTIPV 346

Query: 361 AAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPF 420
             P+  G+G D + FG++ V  VEIG+++PP G+++F +++ L  P V ++ IF    PF
Sbjct: 347 FFPVITGLGFDPVWFGVLIVTIVEIGMISPPVGMNLFVMNSLL--PQVRLKHIFQGVWPF 404

Query: 421 IAVMLLVLVIVALVP 435
           +   ++ L I+   P
Sbjct: 405 VMADIVRLGILIAFP 419