Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  215 bits (548), Expect = 2e-60
 Identities = 132/431 (30%), Positives = 240/431 (55%), Gaps = 28/431 (6%)

Query: 11  IGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPLFV 70
           +G ++ L L+G+ +  A+ G + + +++   ++      L    YS    +L   IPLF+
Sbjct: 11  LGAILALSLLGVPVGQAMIGGSVIYLYMKGMDMGTVAEQLLNGTYSS---FLLLAIPLFI 67

Query: 71  LMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRVAV 130
           L   ++   +V     +    L+     GL    V  + +FA+++G ++A AA   ++  
Sbjct: 68  LAATIMGSGSVLDRLMKFCNALVGHFPGGLAQVNVLQSVVFASMSGSALADAAGSGKLMQ 127

Query: 131 PEMTRHG-YRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLMLA 189
             MT+   Y   F+A   A SSVLG ++PPS+ L++Y +++  SIG +F+AG+LPGL+L 
Sbjct: 128 VMMTKDNRYTAGFAAALTAASSVLGPILPPSIPLVLYALVSGTSIGYLFIAGVLPGLLLG 187

Query: 190 GGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTP-MPAREM---IAKLTPIVLLVILV 245
                + +GL                A+KR+  + P +P RE+     +  P ++L +++
Sbjct: 188 A----VQMGLVHYL------------AKKRNFPVEPRVPLRELPRITREAFPALMLPVVL 231

Query: 246 LGGLYTGFFTPTEAGGIGAFGALIVA-LSRRSLDRHKLWQVMKQTGVISVSILLLLVAAS 304
           LG LYTG  TPTEA G+ A  AL+++ L  RS+    L+  +  +  IS+SI +L+  A 
Sbjct: 232 LGCLYTGITTPTEAAGLAAAYALLISVLLYRSIGWKDLYDALLSSARISISIGMLIAGAL 291

Query: 305 FYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPI 364
            ++ ++ +  +P +++G+++     PLGFL    +I+L++G  L+ ++I+L+++P+  P 
Sbjct: 292 VFNYVITVENIPASLSGILSTFDLSPLGFLLLVNLILLVLGCFLEGSTIILVILPVLLPT 351

Query: 365 AQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVM 424
           A  +G+D +HFG+V VL + IGL+TPP+G+ +F +       D+S+  +    +PF+ VM
Sbjct: 352 AVALGVDPVHFGVVAVLNIMIGLVTPPYGLLLFMMTKI---ADISLMELVREMVPFLVVM 408

Query: 425 LLVLVIVALVP 435
           +  L IV L P
Sbjct: 409 IGALAIVTLWP 419