Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 431 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  217 bits (553), Expect = 5e-61
 Identities = 132/440 (30%), Positives = 227/440 (51%), Gaps = 27/440 (6%)

Query: 9   VLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPL 68
           ++  V++ L+ + + IA+++F     G ++ +  +   F  L   A++  A Y  + IPL
Sbjct: 1   MIFAVMLVLMAIRVPIAVSMFAAGTFG-YIYQVGLPPFFNNLNGMAFARFASYDLSVIPL 59

Query: 69  FVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRV 128
           F+LMG   +   + +  FQ A  ++ R   GL +A V A+  F A+ G S+A+AA  T V
Sbjct: 60  FILMGNFATQGGISKALFQFAAVVMGRFKGGLAMAAVLASAGFGAICGSSVATAATITSV 119

Query: 129 AVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLML 188
           A+PEM RHGY    + GT+A    LG+LIPPS+ L+IY IL E +I  +F A ++PG   
Sbjct: 120 ALPEMKRHGYSGRLATGTLAAGGTLGVLIPPSVPLVIYAILTEQNIAKLFAAAMVPG--- 176

Query: 189 AGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLGG 248
               ++ ++G  +A   +V   P    A + D +   +  + ++  L PI ++ ++V GG
Sbjct: 177 ----IIAMLGYMIAIAVYVRLVPG--HAPEHDANEQKLTLQALMGVL-PIAIVFLIVFGG 229

Query: 249 LYTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLLVAASFYSR 308
           +Y G FTPTE  G+GA    + AL +R L   K+      T   S  I ++ + A   + 
Sbjct: 230 IYGGLFTPTEGAGVGAAATFVAALFKRELTWAKVKLCFYSTAAASAMIFMIFIGADLMNS 289

Query: 309 MLAIAGLPNAITGLVTDSGFGPL----GFLFFYAVIILLMGMILDSTSILLIMVPIAAPI 364
            LA+  +P  +  ++      PL    G L FY V    +G ++D  S++L+ +PI  P+
Sbjct: 290 ALALTQVPAQLASVIQGWDVSPLMVVGGILLFYVV----LGAVMDELSMILLTIPIFFPV 345

Query: 365 AQGMGIDL------MHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATL 418
             G+   +      + FGI+ ++ V  GLL PP G++V+ V+       V +   +   +
Sbjct: 346 VMGLDFGMPQESVAIWFGIMVLMTVGFGLLAPPVGLNVYVVNGMAK--TVPIGESYRGVM 403

Query: 419 PFIAVMLLVLVIVALVPTTA 438
           PF+A  ++  ++V   P  +
Sbjct: 404 PFLASDVIRSMLVLFFPAVS 423