Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  219 bits (557), Expect = 2e-61
 Identities = 131/436 (30%), Positives = 235/436 (53%), Gaps = 21/436 (4%)

Query: 8   FVLIGVLV---GLVLMGMHI--AIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYL 62
           +++IG+ V   GL+  GM +  AI L G+A+  +WL +  +  A   L L ++  +  Y 
Sbjct: 4   YLIIGIFVLFIGLLATGMSVPFAILLPGIAY--LWL-QGGVG-ALHGLGLASWGSMDSYT 59

Query: 63  FATIPLFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASA 122
              IPLFVLM  ++  S +G   +    +L+RR+  GL    +A   +FAAV+G S+A+A
Sbjct: 60  LTAIPLFVLMADILQGSGLGLRVYGGLSKLVRRVPGGLLQTNIAGCAVFAAVSGSSVATA 119

Query: 123 AVFTRVAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGI 182
           A   +VA+PE+    Y    + G++A    LG+LIPPS+ +I+Y    E S+  +F+AG+
Sbjct: 120 ASIGKVALPELKARRYDARLATGSLAAGGTLGILIPPSIAMIVYATFTETSVAKLFMAGV 179

Query: 183 LPGLMLAGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLV 242
           +PG++L   F+  L    +  P      P   +   R+T L        +  + P +LL+
Sbjct: 180 IPGVVLTLMFMAYLAFAAIRRPGIA---PRETEPLTRETVL------RALVDIVPFMLLI 230

Query: 243 ILVLGGLYTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLLVA 302
           + ++G +YTG  TPTEA   G   A+++A     L   +    +K++ +++ +IL +  A
Sbjct: 231 LGIMGAIYTGVATPTEAAAAGCIFAIVIARLFGQLPWREFVDCLKRSTLVTSNILFITYA 290

Query: 303 ASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAA 362
           A  +S  +A+AG+   IT  +       + FL    ++   +G +++S  +++I VP+  
Sbjct: 291 AFIFSYAMAVAGVGEDITAFIVGLNLSKMEFLLALFILFTALGALVESLGMIVITVPLLY 350

Query: 363 PIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIA 422
           P+    GID + FGIV V+ +E+G +TPP GI++F + +       ++  +   T+PF  
Sbjct: 351 PLLAPYGIDPVWFGIVVVVFIEMGQITPPIGINLFVIQSIARG---NLSDVVMGTIPFHL 407

Query: 423 VMLLVLVIVALVPTTA 438
           +M L++ ++ ++P  A
Sbjct: 408 IMFLLVALLIVLPELA 423